RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 TIMM23O14925 209 aa8.13□□□□□ -1.11
PALB2-201ENST00000261584 SRD5A1P18405 259 aa8.13□□□□□ -1.11
PALB2-201ENST00000261584 SAPCD1Q5SSQ6 148 aa8.13□□□□□ -1.11
PALB2-201ENST00000261584 OR2K2Q8NGT1 345 aa8.13□□□□□ -1.11
PALB2-201ENST00000261584 SLC25A39Q9BZJ4 359 aaPredicted RBP8.13□□□□□ -1.11
PALB2-201ENST00000261584 APOMO95445 188 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 C3orf36Q3SXR2 165 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 AMTNQ6UX39 209 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 ORAOV1Q8WV07 137 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 BEX4Q9NWD9 120 aaPredicted RBP8.12□□□□□ -1.11
PALB2-201ENST00000261584 ZFYVE26Q68DK2 2539 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 ERCC8Q13216 396 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 PCP2Q8IVA1 136 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 CACNG8Q8WXS5 425 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 TRAV9-1A0A075B6T8 112 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 GATA1P15976 413 aaPredicted RBP8.12□□□□□ -1.11
PALB2-201ENST00000261584 KIR3DS1Q14943 382 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 PRR7Q8TB68 274 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 LINC00312Q9Y6C7 94 aa8.12□□□□□ -1.11
PALB2-201ENST00000261584 NDPQ00604 133 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 FAM71F2Q6NXP2 309 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 OR1N2Q8NGR9 330 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 GTSF1Q8WW33 167 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 CPAMD8Q8IZJ3 1885 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 NCKAP5O14513 1909 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 TRAV26-2A0A0B4J265 109 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 SMIM27A0A1W2PRY6 76 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 CD3EP07766 207 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
PALB2-201ENST00000261584 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 SPATA12Q7Z6I5 190 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 RNF182Q8N6D2 247 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 FXYD5Q96DB9 178 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
PALB2-201ENST00000261584 MC5RP33032 325 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 FAM74A4Q5TZK3 123 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 SLC25A48Q6ZT89 311 aaKnown RBP8.11□□□□□ -1.11
PALB2-201ENST00000261584 ORMDL3Q8N138 153 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 BCL6BQ8N143 479 aaPredicted RBP8.11□□□□□ -1.11
PALB2-201ENST00000261584 C19orf24Q9BVV8 132 aa8.11□□□□□ -1.11
PALB2-201ENST00000261584 F2RL2O00254 374 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 PRR30Q53SZ7 412 aaPredicted RBP8.1□□□□□ -1.11
PALB2-201ENST00000261584 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 IFI27L1Q96BM0 104 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 RNF125Q96EQ8 232 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 TIMD4Q96H15 378 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 MSRB1Q9NZV6 116 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 DKK2Q9UBU2 259 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 RABAC1Q9UI14 185 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 SCGB2A1O75556 95 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
PALB2-201ENST00000261584 ANKRD39Q53RE8 183 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 FAM120AOSQ5T036 256 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 RUSC1-AS1Q66K80 236 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 Q8N7P7 452 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 COL12A1Q99715 3063 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 IGHV3-64A0A075B6Q5 118 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 IGHV2-26A0A0B4J1V2 119 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 IGHV3-11P01762 117 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 MYOZ3Q8TDC0 251 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 C11orf52Q96A22 123 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 C1RLQ9NZP8 487 aa8.1□□□□□ -1.11
PALB2-201ENST00000261584 C22orf46C9J442 243 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 J3QW42 95 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 CRYABP02511 175 aaKnown RBP8.09□□□□□ -1.11
PALB2-201ENST00000261584 PSG3Q16557 428 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 ZNF788Q6ZQV5 615 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 ABHD17AQ96GS6 310 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 FMC1Q96HJ9 113 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 ST20Q9HBF5 79 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 NDUFA4L2Q9NRX3 87 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 ATG2AQ2TAZ0 1938 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 IGLC7A0M8Q6 106 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 P0C879 139 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 LY6EQ16553 131 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 C1orf159Q96HA4 380 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 VKORC1Q9BQB6 163 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 MAP1LC3AQ9H492 121 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 ZZEF1O43149 2961 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 PIEZO1Q92508 2521 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
PALB2-201ENST00000261584 FAM167A-AS1Q96KT0 104 aa8.09□□□□□ -1.11
PALB2-201ENST00000261584 IGLV2-8P01709 118 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 SMIM13P0DJ93 91 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 KHDC1LQ5JSQ8 128 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 CLEC19AQ6UXS0 136 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 PLSCR4Q9NRQ2 329 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 MRPS16Q9Y3D3 137 aaKnown RBP8.08□□□□□ -1.12
PALB2-201ENST00000261584 A0A1B0GWB2 263 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 Q86TA4 180 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 MRPL27Q9P0M9 148 aaKnown RBP8.08□□□□□ -1.12
PALB2-201ENST00000261584 DSCAMO60469 2012 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 TRAV30A0A087WSZ9 112 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 PSMB2P49721 201 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 TMPRSS3P57727 454 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 ZC2HC1BQ5TFG8 222 aa8.08□□□□□ -1.12
PALB2-201ENST00000261584 C8orf46Q8TAG6 207 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms