RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 C19orf84I3L1E1 186 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 C2orf88Q9BSF0 95 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 TRBV19A0A075B6N1 114 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 LGALS1P09382 135 aaKnown RBP12.6□□□□□ -0.39
SYT1-201ENST00000261205 LMO4P61968 165 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 ZNF502Q8TBZ5 544 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 SCGB1C2P0DMR2 95 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 LY6G5BQ8NDX9 201 aa12.6□□□□□ -0.39
SYT1-201ENST00000261205 IGF2RP11717 2491 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 EMP1P54849 157 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 FOXA3P55318 350 aaPredicted RBP12.59□□□□□ -0.39
SYT1-201ENST00000261205 TCTEX1D4Q5JR98 221 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 TMEM75Q8N9X5 138 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 IGFBPL1Q8WX77 278 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 TRBV24-1A0A075B6N3 115 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 TMEM262E9PQX1 116 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 M0R3E3 92 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 NDUFS6O75380 124 aaKnown RBP12.59□□□□□ -0.39
SYT1-201ENST00000261205 DEFB131AP59861 70 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 ZFP36P26651 326 aaKnown RBP12.59□□□□□ -0.39
SYT1-201ENST00000261205 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
SYT1-201ENST00000261205 LINC01559Q495D7 138 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 PET117Q6UWS5 81 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 Q8N7P7 452 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 RCHY1Q96PM5 261 aa12.59□□□□□ -0.39
SYT1-201ENST00000261205 IGHV7-81A0A0B4J1V7 117 aa12.58□□□□□ -0.4
SYT1-201ENST00000261205 IGHV7-4-1A0A0J9YVY3 117 aa12.58□□□□□ -0.4
SYT1-201ENST00000261205 ZNF324O75467 553 aaPredicted RBP12.58□□□□□ -0.4
SYT1-201ENST00000261205 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.4
SYT1-201ENST00000261205 MED12LQ86YW9 2145 aa12.58□□□□□ -0.4
SYT1-201ENST00000261205 PRADC1Q9BSG0 188 aa12.58□□□□□ -0.4
SYT1-201ENST00000261205 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
SYT1-201ENST00000261205 ORMDL2Q53FV1 153 aa12.58□□□□□ -0.4
SYT1-201ENST00000261205 J3QR89 54 aa12.58□□□□□ -0.4
SYT1-201ENST00000261205 TNFRSF13BO14836 293 aaPredicted RBP12.58□□□□□ -0.4
SYT1-201ENST00000261205 ABCA1O95477 2261 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 CGB3P0DN86 165 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 CGB7P0DN87 165 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 A6NJY4 79 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 VWC2Q2TAL6 325 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 IL17RELQ6ZVW7 336 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 Q86TA4 180 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 NRGNQ92686 78 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 ZNF492Q9P255 531 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 A6NDN8 102 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 NDUFA3O95167 84 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
SYT1-201ENST00000261205 Q8N9W7 124 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 TMEM170AQ8WVE7 144 aa12.57□□□□□ -0.4
SYT1-201ENST00000261205 PRR20EP86478 221 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 PRR20CP86479 221 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 PRR20DP86480 221 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 PRR20BP86481 221 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 PRR20AP86496 221 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.4
SYT1-201ENST00000261205 C11orf71Q6IPW1 123 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 SCGB3A1Q96QR1 104 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 HTN3P15516 51 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 VAMP3Q15836 100 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 GFRA4Q9GZZ7 299 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 H3BVH4 76 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 C5orf56Q8N8D9 126 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 ZNF414Q96IQ9 312 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
SYT1-201ENST00000261205 H3BRM9 83 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 SH2D1AO60880 128 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 LGALS3P17931 250 aaKnown RBP12.55□□□□□ -0.4
SYT1-201ENST00000261205 RPL13AP40429 203 aaKnown RBP12.55□□□□□ -0.4
SYT1-201ENST00000261205 ERASQ7Z444 233 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 ZNF491Q8N8L2 437 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 PKIAP61925 76 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 KLK15Q9H2R5 256 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 OR4C5Q8NGB2 326 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 MRPL53Q96EL3 112 aaKnown RBP12.55□□□□□ -0.4
SYT1-201ENST00000261205 PMCHL2Q9BQD1 86 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 SMPXQ9UHP9 88 aa12.55□□□□□ -0.4
SYT1-201ENST00000261205 CT83Q5H943 113 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 TRAV12-3A0A0B4J271 114 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 PGPEP1LA6NFU8 196 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.54□□□□□ -0.4
SYT1-201ENST00000261205 C8orf86Q6ZUL3 223 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 IGLV11-55A0A075B6I3 123 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 COTL1Q14019 142 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 DPH3P1Q9H4G8 78 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 MUC21A0A0G2JKD1 596 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 MUC21A0A140T8X8 626 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 NMUP48645 174 aa12.54□□□□□ -0.4
SYT1-201ENST00000261205 Q71RC1 249 aaPredicted RBP12.54□□□□□ -0.4
SYT1-201ENST00000261205 CRYGCP07315 174 aa12.53□□□□□ -0.4
SYT1-201ENST00000261205 IFI27P40305 119 aaPredicted RBP12.53□□□□□ -0.4
SYT1-201ENST00000261205 APOC4P55056 127 aa12.53□□□□□ -0.4
SYT1-201ENST00000261205 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
SYT1-201ENST00000261205 UBE2E2Q96LR5 201 aa12.53□□□□□ -0.4
SYT1-201ENST00000261205 IGHG2P01859 326 aa12.53□□□□□ -0.4
SYT1-201ENST00000261205 RNF224P0DH78 156 aa12.53□□□□□ -0.4
SYT1-201ENST00000261205 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
SYT1-201ENST00000261205 HAPLN4Q86UW8 402 aa12.53□□□□□ -0.4
SYT1-201ENST00000261205 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms