RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 SH2D7A6NKC9 451 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 KLF5Q13887 457 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 ZNF705AQ6ZN79 300 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 ITLN2Q8WWU7 325 aaPredicted RBP12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 PSG8Q9UQ74 426 aa12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 TRAV30A0A087WSZ9 112 aa12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 PSG3Q16557 428 aa12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 TMEM75Q8N9X5 138 aa12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
UBQLN1-201ENST00000257468 OVOL3O00110 214 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 HSBP1O75506 76 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 CRIP1P50238 77 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 PMCHL1Q16048 86 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 C20orf144Q9BQM9 153 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 COL12A1Q99715 3063 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 OOSP1A8MZH6 123 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 GNLYP22749 145 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 SAA4P35542 130 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 EFNA4P52798 201 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 ECSCRQ19T08 205 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 IGFL4Q6B9Z1 124 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 LCN12Q6JVE5 192 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 ATOH7Q8N100 152 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 GFRA4Q9GZZ7 299 aa12.92□□□□□ -0.34
UBQLN1-201ENST00000257468 M0R2Z0 102 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 CTSGP08311 255 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 C16orf54Q6UWD8 224 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 ZNF48Q96MX3 618 aaPredicted RBP12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 APOHP02749 345 aaPredicted RBP12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 LMO4P61968 165 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 LYPD1Q8N2G4 141 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 TMUB1Q9BVT8 246 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 C1RLQ9NZP8 487 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 RNF24Q9Y225 148 aa12.91□□□□□ -0.34
UBQLN1-201ENST00000257468 FAM106CPP0CH98 169 aa12.9□□□□□ -0.34
UBQLN1-201ENST00000257468 THYN1Q9P016 225 aa12.9□□□□□ -0.34
UBQLN1-201ENST00000257468 CACNA1BQ00975 2339 aa12.9□□□□□ -0.34
UBQLN1-201ENST00000257468 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 FAM181BA6NEQ2 426 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 LINC01548A6NM66 108 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 K7EQM0 130 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 UBE2E1P51965 193 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 EBLN2Q6P2I7 272 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 OR4B1Q8NGF8 309 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 MIEN1Q9BRT3 115 aa12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 SOX21Q9Y651 276 aaPredicted RBP12.9□□□□□ -0.35
UBQLN1-201ENST00000257468 CHEK1O14757 476 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 ATP6V0E1O15342 81 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 MAJINQ3KP22 176 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 TPPP3Q9BW30 176 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 CLEC5AQ9NY25 188 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 ZFP30Q9Y2G7 519 aa12.89□□□□□ -0.35
UBQLN1-201ENST00000257468 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 RAB4AP20338 218 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 HLA-DMBP28068 263 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 GPR183P32249 361 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 SSTP61278 116 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 SPATA45Q537H7 98 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 UNQ5815/PRO19632Q6UWF5 114 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 PIEZO1Q92508 2521 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 IGHV3OR16-10A0A075B7F0 116 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 FAM231BA6NCW3 169 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 G3V318 75 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 M0R143 59 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 CTRLP40313 264 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 ZNF138P52744 262 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 C15orf32Q32M92 178 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
UBQLN1-201ENST00000257468 CACNA1AO00555 2505 aa12.87□□□□□ -0.35
UBQLN1-201ENST00000257468 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
UBQLN1-201ENST00000257468 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
UBQLN1-201ENST00000257468 SPATA12Q7Z6I5 190 aa12.87□□□□□ -0.35
UBQLN1-201ENST00000257468 HAX1O00165 279 aa12.87□□□□□ -0.35
UBQLN1-201ENST00000257468 PDE6HQ13956 83 aa12.87□□□□□ -0.35
UBQLN1-201ENST00000257468 RABAC1Q9UI14 185 aa12.87□□□□□ -0.35
UBQLN1-201ENST00000257468 Q8TAT8 98 aa12.86□□□□□ -0.35
UBQLN1-201ENST00000257468 A0A1B0GUT8 65 aa12.86□□□□□ -0.35
UBQLN1-201ENST00000257468 C2orf70A6NJV1 201 aa12.86□□□□□ -0.35
UBQLN1-201ENST00000257468 RHOGP84095 191 aa12.86□□□□□ -0.35
UBQLN1-201ENST00000257468 LINC00173Q6ZV60 143 aa12.86□□□□□ -0.35
UBQLN1-201ENST00000257468 IGHV4-39P01824 125 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 NUTF2P61970 127 aaKnown RBP12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 S100A7AQ86SG5 101 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 TMEM219Q86XT9 240 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 ABCA2Q9BZC7 2435 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 IGHV1-24A0A0C4DH33 117 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 IGHV3-66A0A0C4DH42 116 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 NPFFO15130 113 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 IGHG4P01861 327 aa12.85□□□□□ -0.35
UBQLN1-201ENST00000257468 CLEC3BP05452 202 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms