RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 A0A0G2JNJ9 132 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 MBD3L4A6NDZ8 208 aaPredicted RBP9.53□□□□□ -0.88
CCNA1-201ENST00000255465 MBD3L3A6NE82 208 aaPredicted RBP9.53□□□□□ -0.88
CCNA1-201ENST00000255465 MBD3L5A6NJ08 208 aaPredicted RBP9.53□□□□□ -0.88
CCNA1-201ENST00000255465 COL8A1P27658 744 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 EDDM3BP56851 147 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 GATD1Q8NB37 220 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 MBD3L2Q8NHZ7 208 aaPredicted RBP9.53□□□□□ -0.88
CCNA1-201ENST00000255465 BORCS8Q96FH0 119 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 UCN2Q96RP3 112 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 LINC01587Q99440 93 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 Q9UFV3 132 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 A0A0J9YW62 118 aa9.52□□□□□ -0.89
CCNA1-201ENST00000255465 CLDN14O95500 239 aa9.52□□□□□ -0.89
CCNA1-201ENST00000255465 CDSNQ15517 529 aa9.52□□□□□ -0.89
CCNA1-201ENST00000255465 SPRNQ5BIV9 151 aa9.52□□□□□ -0.89
CCNA1-201ENST00000255465 MOB3BQ86TA1 216 aa9.52□□□□□ -0.89
CCNA1-201ENST00000255465 TMEM158Q8WZ71 300 aa9.52□□□□□ -0.89
CCNA1-201ENST00000255465 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
CCNA1-201ENST00000255465 USP9YO00507 2555 aaPredicted RBP9.52□□□□□ -0.89
CCNA1-201ENST00000255465 PTPN13Q12923 2485 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
CCNA1-201ENST00000255465 TNFAIP6P98066 277 aaPredicted RBP9.51□□□□□ -0.89
CCNA1-201ENST00000255465 C9orf106Q8NAJ2 232 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 RITA1Q96K30 269 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 HSD17B10Q99714 261 aaKnown RBP9.51□□□□□ -0.89
CCNA1-201ENST00000255465 FAM234AQ9H0X4 552 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 TRBV20-1A0A075B6N2 111 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 HIGD1CA8MV81 97 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 CXCL13O43927 109 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 SCTP09683 121 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 ORM2P19652 201 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 HES1Q14469 280 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 PIGYQ3MUY2 71 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 LINC00596Q86U02 117 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 FGFRL1Q8N441 504 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 TMUB1Q9BVT8 246 aa9.51□□□□□ -0.89
CCNA1-201ENST00000255465 C15orf62A8K5M9 175 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 SYNGR3O43761 229 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 EFNB3Q15768 340 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 IZUMO4Q1ZYL8 232 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 TMEM219Q86XT9 240 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 C1orf162Q8NEQ5 155 aaPredicted RBP9.5□□□□□ -0.89
CCNA1-201ENST00000255465 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 ENY2Q9NPA8 101 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 FREM1Q5H8C1 2179 aa9.5□□□□□ -0.89
CCNA1-201ENST00000255465 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 C9JAW5 83 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 F5H768 121 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 SPRY1O43609 319 aaPredicted RBP9.49□□□□□ -0.89
CCNA1-201ENST00000255465 BCL3P20749 454 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 GLRXP35754 106 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 FOXF2Q12947 444 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 GJC3Q8NFK1 279 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 ZNF414Q96IQ9 312 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 HIGD1AQ9Y241 93 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 UTP20O75691 2785 aaKnown RBP9.49□□□□□ -0.89
CCNA1-201ENST00000255465 IGKV1-6A0A0C4DH72 117 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 A8MWV9 139 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 K7ERJ3 54 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 FKBP2P26885 142 aaKnown RBP9.49□□□□□ -0.89
CCNA1-201ENST00000255465 CAMPP49913 170 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
CCNA1-201ENST00000255465 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 MGST2Q99735 147 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 SRXN1Q9BYN0 137 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 PRRG4Q9BZD6 226 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 ZNF355PQ9NSJ1 428 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 ZNF492Q9P255 531 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 TCF19Q9Y242 345 aa9.49□□□□□ -0.89
CCNA1-201ENST00000255465 HAX1O00165 279 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 CHEK1O14757 476 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 NCR2O95944 276 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 C8orf88P0DMB2 117 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 DEFA4P12838 97 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 NMUP48645 174 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 PRR31Q5SQ13 230 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 PCP2Q8IVA1 136 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 OR11H6Q8NGC7 330 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 OR13A1Q8NGR1 328 aa9.48□□□□□ -0.89
CCNA1-201ENST00000255465 LSM4Q9Y4Z0 139 aaKnown RBP9.48□□□□□ -0.89
CCNA1-201ENST00000255465 IGKV1-27A0A075B6S5 117 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 IGKV1-12A0A0C4DH73 117 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 DUSP14O95147 198 aaKnown RBP9.47□□□□□ -0.89
CCNA1-201ENST00000255465 IGKV1D-12P01611 117 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 Q6ZR03 302 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 KIR2DL5BQ8NHK3 375 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 FAM168AQ92567 244 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 SPTSSAQ969W0 71 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 AJUBAQ96IF1 538 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 TMEM101Q96IK0 257 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 GPHA2Q96T91 129 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 PRADC1Q9BSG0 188 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 ZMAT4Q9H898 229 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 PKDREJQ9NTG1 2253 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 TRBV25-1A0A075B6N4 114 aa9.47□□□□□ -0.89
CCNA1-201ENST00000255465 CRLF1O75462 422 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms