RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 DYNAPQ8N1N2 210 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
RFX1-201ENST00000254325 A0A1B0GUT8 65 aa12.4□□□□□ -0.42
RFX1-201ENST00000254325 G3V318 75 aa12.4□□□□□ -0.42
RFX1-201ENST00000254325 NDUFA3O95167 84 aa12.4□□□□□ -0.42
RFX1-201ENST00000254325 RAB9AP51151 201 aa12.4□□□□□ -0.42
RFX1-201ENST00000254325 SAPCD1Q5SSQ6 148 aa12.4□□□□□ -0.42
RFX1-201ENST00000254325 IGFL4Q6B9Z1 124 aa12.4□□□□□ -0.42
RFX1-201ENST00000254325 SOX21Q9Y651 276 aaPredicted RBP12.4□□□□□ -0.42
RFX1-201ENST00000254325 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.43
RFX1-201ENST00000254325 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.43
RFX1-201ENST00000254325 MUC21A0A140T8X8 626 aa12.4□□□□□ -0.43
RFX1-201ENST00000254325 A1L4Q6 167 aa12.4□□□□□ -0.43
RFX1-201ENST00000254325 ODF3BA8MYP8 253 aa12.4□□□□□ -0.43
RFX1-201ENST00000254325 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.43
RFX1-201ENST00000254325 MUC21Q5SSG8 566 aa12.4□□□□□ -0.43
RFX1-201ENST00000254325 J3KRW8 73 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 IGLV2-8P01709 118 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 BMI1P35226 326 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 REC114Q7Z4M0 266 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 SMIM12Q96EX1 92 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 NUPR1O60356 82 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 NDPQ00604 133 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 LYPD1Q8N2G4 141 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 PPP1R14DQ9NXH3 145 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 MOB4Q9Y3A3 225 aa12.39□□□□□ -0.43
RFX1-201ENST00000254325 F2Z2F3 143 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
RFX1-201ENST00000254325 COX6B1P14854 86 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 RASL11AQ6T310 242 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 MRPL27Q9P0M9 148 aaKnown RBP12.38□□□□□ -0.43
RFX1-201ENST00000254325 IGLV11-55A0A075B6I3 123 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 Q0VG73 95 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 KLHDC1Q8N7A1 406 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 IGHV7-81A0A0B4J1V7 117 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 SLAQ13239 276 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 PSG3Q16557 428 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 FAM110DQ8TAY7 271 aaPredicted RBP12.38□□□□□ -0.43
RFX1-201ENST00000254325 SIRPDQ9H106 197 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 IGHV4-39P01824 125 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 TMEM78Q5T7P6 136 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 ZNF664Q8N3J9 261 aa12.38□□□□□ -0.43
RFX1-201ENST00000254325 TRAV41A0A0B4J266 112 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 IGHV3-11P01762 117 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 DNLZQ5SXM8 178 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 ATOH7Q8N100 152 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 PRDM13Q9H4Q3 707 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 A0A1W2PPR1 153 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 TWIST1Q15672 202 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 ARL6IP6Q8N6S5 226 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 ZNF492Q9P255 531 aa12.37□□□□□ -0.43
RFX1-201ENST00000254325 PTTG1IPP53801 180 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 Q8N9W7 124 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 LOC389332A0A1B0GUA5 103 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 LTAP01374 205 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 MRGPRG-AS1Q2M3A8 158 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 Q8TAT8 98 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 CLEC5AQ9NY25 188 aa12.36□□□□□ -0.43
RFX1-201ENST00000254325 H3BUX3 64 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 GPX1P07203 203 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 HNRNPA3P51991 378 aaKnown RBP12.35□□□□□ -0.43
RFX1-201ENST00000254325 PDE6HQ13956 83 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 ZNF414Q96IQ9 312 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 ARL3P36405 182 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 OR4C5Q8NGB2 326 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 IGHV1-69DA0A0B4J2H0 117 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 IGHV1-69P01742 117 aa12.35□□□□□ -0.43
RFX1-201ENST00000254325 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 LMO4P61968 165 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 CSPG4Q6UVK1 2322 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 SPATA45Q537H7 98 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 IGHV4-61A0A0C4DH41 118 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 S100A4P26447 101 aaKnown RBP12.34□□□□□ -0.43
RFX1-201ENST00000254325 TMEM75Q8N9X5 138 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 C18orf32Q8TCD1 76 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 KLF12Q9Y4X4 402 aa12.34□□□□□ -0.43
RFX1-201ENST00000254325 A0A1W2PS18 150 aa12.33□□□□□ -0.43
RFX1-201ENST00000254325 Q6ZWC4 215 aa12.33□□□□□ -0.43
RFX1-201ENST00000254325 RPS20P60866 119 aaKnown RBP12.33□□□□□ -0.44
RFX1-201ENST00000254325 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 CREBBPQ92793 2442 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 CENPVL3A0A0U1RRI6 287 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 CT83Q5H943 113 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 Q6AWC8 147 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 SIGLEC15Q6ZMC9 328 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 Q6ZN92 141 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 NIT1Q86X76 327 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 ZC2HC1AQ96GY0 325 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 RCHY1Q96PM5 261 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 NDUFAF3Q9BU61 184 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 DMXL2Q8TDJ6 3036 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 TCF21O43680 179 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 C8orf49Q96NF6 230 aa12.33□□□□□ -0.44
RFX1-201ENST00000254325 TMEM190Q8WZ59 177 aa12.32□□□□□ -0.44
RFX1-201ENST00000254325 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms