RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CLPSL1A2RUU4 121 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 FAM223BA6NKX1 122 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 DIRC3C9JPN6 131 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 TGFAP01135 160 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 PPIFP30405 207 aaKnown RBP14.31□□□□□ -0.12
HOXC11-201ENST00000243082 PRNTQ86SH4 94 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 FAM223AQ8IWN6 122 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 OR10D4PQ8NGN7 298 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 HIST1H2BLQ99880 126 aa14.31□□□□□ -0.12
HOXC11-201ENST00000243082 SNURFLB1AK76 121 aa14.3□□□□□ -0.12
HOXC11-201ENST00000243082 RNF223E7ERA6 249 aa14.3□□□□□ -0.12
HOXC11-201ENST00000243082 J3QLI3 93 aa14.3□□□□□ -0.12
HOXC11-201ENST00000243082 PRB4P10163 310 aaPredicted RBP14.3□□□□□ -0.12
HOXC11-201ENST00000243082 FABP4P15090 132 aa14.3□□□□□ -0.12
HOXC11-201ENST00000243082 Q6ZS46 218 aa14.3□□□□□ -0.12
HOXC11-201ENST00000243082 CIARTQ8N365 385 aaPredicted RBP14.3□□□□□ -0.12
HOXC11-201ENST00000243082 TSKUQ8WUA8 353 aa14.3□□□□□ -0.12
HOXC11-201ENST00000243082 NOL4LQ96MY1 436 aaPredicted RBP14.3□□□□□ -0.12
HOXC11-201ENST00000243082 ATP6V0BQ99437 205 aa14.3□□□□□ -0.12
HOXC11-201ENST00000243082 TRGV3P03979 118 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 S100A7P31151 101 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 RPL19P84098 196 aaKnown RBP14.29□□□□□ -0.12
HOXC11-201ENST00000243082 PSG9Q00887 426 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 DEFB113Q30KQ7 82 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 TMEM136Q6ZRR5 245 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 AAMDCQ9H7C9 122 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 BEX4Q9NWD9 120 aaPredicted RBP14.29□□□□□ -0.12
HOXC11-201ENST00000243082 ZNF785A8K8V0 405 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 BUB3O43684 328 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 PSG3Q16557 428 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 MRPL54Q6P161 138 aaKnown RBP14.29□□□□□ -0.12
HOXC11-201ENST00000243082 NUP35Q8NFH5 326 aa14.29□□□□□ -0.12
HOXC11-201ENST00000243082 CSPG4Q6UVK1 2322 aa14.28□□□□□ -0.12
HOXC11-201ENST00000243082 K7EQM0 130 aa14.28□□□□□ -0.12
HOXC11-201ENST00000243082 BRI3O95415 125 aa14.28□□□□□ -0.12
HOXC11-201ENST00000243082 DEFB112Q30KQ8 113 aa14.28□□□□□ -0.12
HOXC11-201ENST00000243082 WDR73Q6P4I2 378 aa14.28□□□□□ -0.12
HOXC11-201ENST00000243082 NEU1Q99519 415 aa14.28□□□□□ -0.12
HOXC11-201ENST00000243082 RPP21Q9H633 154 aaKnown RBP14.28□□□□□ -0.12
HOXC11-201ENST00000243082 PSG8Q9UQ74 426 aa14.28□□□□□ -0.12
HOXC11-201ENST00000243082 COX19Q49B96 90 aa14.27□□□□□ -0.12
HOXC11-201ENST00000243082 PYY3Q5JQD4 70 aa14.27□□□□□ -0.12
HOXC11-201ENST00000243082 NAT8BQ9UHF3 227 aa14.27□□□□□ -0.12
HOXC11-201ENST00000243082 ZFP30Q9Y2G7 519 aa14.27□□□□□ -0.12
HOXC11-201ENST00000243082 ZANQ9Y493 2812 aa14.27□□□□□ -0.12
HOXC11-201ENST00000243082 PCP4L1A6NKN8 68 aa14.27□□□□□ -0.13
HOXC11-201ENST00000243082 P01737 135 aa14.27□□□□□ -0.13
HOXC11-201ENST00000243082 AMBPP02760 352 aa14.27□□□□□ -0.13
HOXC11-201ENST00000243082 MT-ND6P03923 174 aa14.27□□□□□ -0.13
HOXC11-201ENST00000243082 IGHV4-31P0DP07 118 aa14.27□□□□□ -0.13
HOXC11-201ENST00000243082 RELQ04864 619 aaPredicted RBP14.27□□□□□ -0.13
HOXC11-201ENST00000243082 CT83Q5H943 113 aa14.27□□□□□ -0.13
HOXC11-201ENST00000243082 LRRC75A-AS1Q8N1F1 130 aa14.27□□□□□ -0.13
HOXC11-201ENST00000243082 A0A1B0GUS0 222 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 HIGD1CA8MV81 97 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 NPIPB6E9PJ23 425 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 H3BUA1 57 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 ZNF253O75346 499 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 IGHG4P01861 327 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 RAB9AP51151 201 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 TPPP2P59282 170 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 PACRGQ96M98 296 aaPredicted RBP14.26□□□□□ -0.13
HOXC11-201ENST00000243082 ASCL2Q99929 193 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 ABCA12Q86UK0 2595 aa14.26□□□□□ -0.13
HOXC11-201ENST00000243082 ARL6IP6Q8N6S5 226 aa14.25□□□□□ -0.13
HOXC11-201ENST00000243082 DAZAP1Q96EP5 407 aaKnown RBP14.25□□□□□ -0.13
HOXC11-201ENST00000243082 ZC2HC1AQ96GY0 325 aa14.25□□□□□ -0.13
HOXC11-201ENST00000243082 NIT2Q9NQR4 276 aa14.25□□□□□ -0.13
HOXC11-201ENST00000243082 GRIFINA4D1Z8 144 aa14.25□□□□□ -0.13
HOXC11-201ENST00000243082 IGHV4-59P01825 116 aa14.25□□□□□ -0.13
HOXC11-201ENST00000243082 APOHP02749 345 aaPredicted RBP14.25□□□□□ -0.13
HOXC11-201ENST00000243082 CSN1S1P47710 185 aa14.25□□□□□ -0.13
HOXC11-201ENST00000243082 Q5PR19 223 aa14.25□□□□□ -0.13
HOXC11-201ENST00000243082 WIPF2Q8TF74 440 aaPredicted RBP14.25□□□□□ -0.13
HOXC11-201ENST00000243082 ZNF331Q9NQX6 463 aaPredicted RBP14.25□□□□□ -0.13
HOXC11-201ENST00000243082 A0A087X0K7 114 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 SERTM2A0A1B0GWG4 89 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 A8MWL6 223 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 RASL11AQ6T310 242 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 C16orf54Q6UWD8 224 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 TCF24Q7RTU0 167 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 TMEM256Q8N2U0 113 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 KLK15Q9H2R5 256 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 U3KQE9 123 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 NAV2Q8IVL1 2488 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 IGHV3-66A0A0C4DH42 116 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 RAB4BP61018 213 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 IGFL4Q6B9Z1 124 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 GBGT1Q8N5D6 347 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 GTSF1Q8WW33 167 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 USMG5Q96IX5 58 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 TP53TG3Q9ULZ0 132 aa14.24□□□□□ -0.13
HOXC11-201ENST00000243082 ZNF207O43670 478 aaKnown RBP14.23□□□□□ -0.13
HOXC11-201ENST00000243082 NUPR1O60356 82 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 FSHBP01225 129 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 IGLV1-40P01703 118 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 TRBV12-3P01733 135 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 HLA-DQA1P01909 254 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 CRISP2P16562 243 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 HLA-DMBP28068 263 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms