RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 GAGE12IP0CL82 117 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 AKR1C4P17516 323 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 CDKN1BP46527 198 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 ERVFC1-1P60608 527 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 SSBP1Q04837 148 aaKnown RBP5.71□□□□□ -1.5
IFT43-201ENST00000238628 TMEM182Q6ZP80 229 aaPredicted RBP5.71□□□□□ -1.5
IFT43-201ENST00000238628 Q6ZRN7 208 aaPredicted RBP5.71□□□□□ -1.5
IFT43-201ENST00000238628 CCDC28AQ8IWP9 274 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 OR8A1Q8NGG7 326 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 LRRC20Q8TCA0 184 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 RNASE8Q8TDE3 154 aaKnown RBP5.71□□□□□ -1.5
IFT43-201ENST00000238628 VCX3AQ9NNX9 186 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 SHPKQ9UHJ6 478 aa5.71□□□□□ -1.5
IFT43-201ENST00000238628 H7BYZ3 331 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 SIVA1O15304 175 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 ATP6V1G2O95670 118 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 IAPPP10997 89 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 CXCL3P19876 107 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 PSG3Q16557 428 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 LINC00612Q8N6U2 182 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 AP3S1Q92572 193 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 PRRT1Q99946 306 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 FUNDC2Q9BWH2 189 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 LRP2P98164 4655 aa5.7□□□□□ -1.5
IFT43-201ENST00000238628 A0A087WXM4 84 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 SNURFLB1AK76 121 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 MED6O75586 246 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 AKAIN1P0CW23 69 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 ANXA3P12429 323 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
IFT43-201ENST00000238628 RAP2BP61225 183 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 RPP30P78346 268 aaKnown RBP5.69□□□□□ -1.5
IFT43-201ENST00000238628 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 CLVS1Q8IUQ0 354 aaPredicted RBP5.69□□□□□ -1.5
IFT43-201ENST00000238628 Q8N3U1 123 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 OR51S1Q8NGJ8 323 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 RPUSD4Q96CM3 377 aaKnown RBP5.69□□□□□ -1.5
IFT43-201ENST00000238628 SCGB3A2Q96PL1 93 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 C20orf144Q9BQM9 153 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 TNFRSF18Q9Y5U5 241 aa5.69□□□□□ -1.5
IFT43-201ENST00000238628 LRP1Q07954 4544 aaKnown RBP5.68□□□□□ -1.5
IFT43-201ENST00000238628 A0A096LPF7 62 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 H3BRN7 92 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 PITX3O75364 302 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 HYPMO75409 117 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 IL5P05113 134 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 OR5G3P0C626 314 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 GCSHP23434 173 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 MRPS10P82664 201 aaKnown RBP5.68□□□□□ -1.5
IFT43-201ENST00000238628 AKR1C1Q04828 323 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 KIR3DS1Q14943 382 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 NFE4Q86UQ8 179 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 VSIG2Q96IQ7 327 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 SHANK2-AS3Q9BTD1 123 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 SCP2D1Q9UJQ7 156 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 HIGD1AQ9Y241 93 aa5.68□□□□□ -1.5
IFT43-201ENST00000238628 A0A087WTM6 91 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 A0A087X0K7 114 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 PIGBOS1A0A0B4J2F0 54 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 PRSS46E5RG02 174 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 WRBO00258 174 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 ANXA7P20073 488 aaKnown RBP5.67□□□□□ -1.5
IFT43-201ENST00000238628 SRPXP78539 464 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 SPANXN5Q5MJ07 72 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 CYP2G1PQ6ZSU1 146 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 TMED4Q7Z7H5 227 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 CCDC190Q86UF4 302 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 CIB3Q96Q77 187 aaPredicted RBP5.67□□□□□ -1.5
IFT43-201ENST00000238628 PARD6GQ9BYG4 376 aaPredicted RBP5.67□□□□□ -1.5
IFT43-201ENST00000238628 TMPRSS5Q9H3S3 457 aa5.67□□□□□ -1.5
IFT43-201ENST00000238628 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 TRAV9-2A0A087WT02 112 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 DUXBA0A1W2PPF3 345 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 SMCO3A2RU48 225 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 J3KRW8 73 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 RGS5O15539 181 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 SYNGR2O43760 224 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 NXPH4O95158 308 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 DNAH10OSP0CZ25 163 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 DAZ2Q13117 558 aaKnown RBP5.66□□□□□ -1.5
IFT43-201ENST00000238628 GFI1BQ5VTD9 330 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 Q6ZTI0 123 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 S100A7AQ86SG5 101 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 SMIM4Q8WVI0 70 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 MIXL1Q9H2W2 232 aa5.66□□□□□ -1.5
IFT43-201ENST00000238628 TRAV12-3A0A0B4J271 114 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 PMS2P5A8MQ11 134 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 CTDSP2O14595 271 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 SNRPCP09234 159 aaKnown RBP5.65□□□□□ -1.5
IFT43-201ENST00000238628 LINC00869P0C866 280 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 SLC25A6P12236 298 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 PLP1P60201 277 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 IL18Q14116 193 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 ACOT7LQ6ZUV0 252 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 TMEM70Q9BUB7 260 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 ARL6Q9H0F7 186 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 MCUBQ9NWR8 336 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 RNF24Q9Y225 148 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 STRAPQ9Y3F4 350 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms