RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 JPT2Q9H910 190 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 IGHV3-23P01764 117 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 SOCS3O14543 225 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 PAX8Q06710 450 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 FCN3O75636 299 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 TIAF1O95411 115 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 S4R3C0 116 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 FREM1Q5H8C1 2179 aa6.73□□□□□ -1.33
APOB-201ENST00000233242 SONP18583 2426 aaKnown RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 AMN1Q8IY45 258 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 V9GYV3 84 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 HAX1O00165 279 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 CEND1Q8N111 149 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 TRAV8-3A0A0A6YYJ7 113 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 DEFB125Q8N687 156 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 Q6P435 159 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 TMEM14BQ9NUH8 114 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 NCOA6Q14686 2063 aaPredicted RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 SBF1O95248 1867 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 IGKV2-40A0A087WW87 121 aaPredicted RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 IGKV2D-40P01614 121 aaPredicted RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 BSPH1Q075Z2 132 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 PAX4O43316 350 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 KLF5Q13887 457 aaPredicted RBP6.72□□□□□ -1.33
APOB-201ENST00000233242 DTX2Q86UW9 622 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 THADAQ6YHU6 1953 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 ATP5J2P56134 94 aa6.72□□□□□ -1.33
APOB-201ENST00000233242 CENPVQ7Z7K6 275 aaPredicted RBP6.71□□□□□ -1.33
APOB-201ENST00000233242 FOXL2NBQ6ZUU3 175 aa6.71□□□□□ -1.33
APOB-201ENST00000233242 RNASE2P10153 161 aaKnown RBP6.71□□□□□ -1.33
APOB-201ENST00000233242 CCL3L1P16619 93 aa6.71□□□□□ -1.33
APOB-201ENST00000233242 BMPERQ8N8U9 685 aa6.71□□□□□ -1.33
APOB-201ENST00000233242 H0YJW9 148 aa6.71□□□□□ -1.33
APOB-201ENST00000233242 NRXN2Q9P2S2 1712 aa6.71□□□□□ -1.33
APOB-201ENST00000233242 TRBV7-1A0A0A6YYK4 115 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 CELA3AP09093 270 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 SCRT1Q9BWW7 348 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 TNRC6AQ8NDV7 1962 aaKnown RBP6.71□□□□□ -1.34
APOB-201ENST00000233242 TRAV40A0A0B4J280 105 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 ZCCHC24Q8N2G6 241 aaKnown RBP6.71□□□□□ -1.34
APOB-201ENST00000233242 LINC00473A8K010 186 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 TCF20Q9UGU0 1960 aaKnown RBP6.71□□□□□ -1.34
APOB-201ENST00000233242 LY6EQ16553 131 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 SIP14410 1827 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 PATE3B3GLJ2 98 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 GATD1Q8NB37 220 aa6.71□□□□□ -1.34
APOB-201ENST00000233242 A0A1B0GUS0 222 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 Q6ZRM9 215 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 FAM201AQ5SY85 155 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 PRO1854Q9UHT4 67 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 PPIFP30405 207 aaKnown RBP6.7□□□□□ -1.34
APOB-201ENST00000233242 TMEM14CQ9P0S9 112 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 SHISA9B4DS77 424 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 K7EMI3 77 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 ITLN2Q8WWU7 325 aaPredicted RBP6.7□□□□□ -1.34
APOB-201ENST00000233242 PYGO2Q9BRQ0 406 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 ACYP1P07311 99 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 ARMS2P0C7Q2 107 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 TIMM23O14925 209 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 HLA-DRB4P13762 266 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 C15orf32Q32M92 178 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 HLA-DRB4X5D2U9 266 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 NDUFB8O95169 186 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 RPL15P61313 204 aaKnown RBP6.7□□□□□ -1.34
APOB-201ENST00000233242 RPL36AP83881 106 aaKnown RBP6.7□□□□□ -1.34
APOB-201ENST00000233242 SRSF2Q01130 221 aaKnown RBP6.7□□□□□ -1.34
APOB-201ENST00000233242 MINOS1Q5TGZ0 78 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 RPL36ALQ969Q0 106 aaKnown RBP6.7□□□□□ -1.34
APOB-201ENST00000233242 MINOS1-NBL1R4GNA1 71 aa6.7□□□□□ -1.34
APOB-201ENST00000233242 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 SRRM4A7MD48 611 aaKnown RBP6.69□□□□□ -1.34
APOB-201ENST00000233242 SRD5A1P18405 259 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 TMEM258P61165 79 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 USMG5Q96IX5 58 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 LSM4Q9Y4Z0 139 aaKnown RBP6.69□□□□□ -1.34
APOB-201ENST00000233242 C14orf178Q8N769 122 aaPredicted RBP6.69□□□□□ -1.34
APOB-201ENST00000233242 PSPNO60542 156 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 F8VRH5 84 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 ERCC8Q13216 396 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 IGLC7A0M8Q6 106 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 IL15RAQ13261 267 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
APOB-201ENST00000233242 SELENOKQ9Y6D0 94 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 ARHGAP21Q5T5U3 1957 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 IGHV3-64A0A075B6Q5 118 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 UBL5Q9BZL1 73 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 TRPM7Q96QT4 1865 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 COL4A1P02462 1669 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 MYO9AB2RTY4 2548 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 TRAV3A0A0B4J244 114 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 C5orf64Q2M2E5 130 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 IL17RELQ6ZVW7 336 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 TMEM126AQ9H061 195 aa6.69□□□□□ -1.34
APOB-201ENST00000233242 MED12LQ86YW9 2145 aa6.68□□□□□ -1.34
APOB-201ENST00000233242 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms