RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 TSTD3H0UI37 97 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 OR2J3O76001 311 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 SIGLEC15Q6ZMC9 328 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 BAGE3Q86Y29 109 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 PRDM13Q9H4Q3 707 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
GAPDH-201ENST00000229239 ZNF253O75346 499 aa13.18□□□□□ -0.3
GAPDH-201ENST00000229239 APCSP02743 223 aa13.18□□□□□ -0.3
GAPDH-201ENST00000229239 RAB4BP61018 213 aa13.18□□□□□ -0.3
GAPDH-201ENST00000229239 PRR27Q6MZM9 219 aa13.18□□□□□ -0.3
GAPDH-201ENST00000229239 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
GAPDH-201ENST00000229239 NUP35Q8NFH5 326 aa13.18□□□□□ -0.3
GAPDH-201ENST00000229239 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
GAPDH-201ENST00000229239 ACANP16112 2415 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 H3BTX0 84 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 BMPR1BO00238 502 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 CLEC2AQ6UVW9 174 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 HSPB9Q9BQS6 159 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 RABAC1Q9UI14 185 aa13.17□□□□□ -0.3
GAPDH-201ENST00000229239 IGHV1-69DA0A0B4J2H0 117 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 CA1P00915 261 aaPredicted RBP13.16□□□□□ -0.3
GAPDH-201ENST00000229239 IGHV1-69P01742 117 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 CTSGP08311 255 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 CSN1S1P47710 185 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 MRPL54Q6P161 138 aaKnown RBP13.16□□□□□ -0.3
GAPDH-201ENST00000229239 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 NEU1Q99519 415 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 ABCA1O95477 2261 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 HIGD1CA8MV81 97 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 IGLV2-11P01706 119 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 DSCR9P59020 149 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 GOLT1AQ6ZVE7 132 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 LRRC75A-AS1Q8N1F1 130 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 MS4A10Q96PG2 267 aa13.16□□□□□ -0.3
GAPDH-201ENST00000229239 FLNAP21333 2647 aaKnown RBP13.16□□□□□ -0.3
GAPDH-201ENST00000229239 SETD2Q9BYW2 2564 aaPredicted RBP13.15□□□□□ -0.3
GAPDH-201ENST00000229239 GRIFINA4D1Z8 144 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 SPINK4O60575 86 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 C5orf56Q8N8D9 126 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 WFDC11Q8NEX6 87 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 ZNF502Q8TBZ5 544 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 MEGF9Q9H1U4 602 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 MOB4Q9Y3A3 225 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 S4R3C0 116 aa13.15□□□□□ -0.3
GAPDH-201ENST00000229239 IGHV4-61A0A0C4DH41 118 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 SLC35B1P78383 322 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 PSG3Q16557 428 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 CDPF1Q6NVV7 123 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
GAPDH-201ENST00000229239 C2CD3Q4AC94 2353 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 TRBV7-1A0A0A6YYK4 115 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 A0A1B0GXF2 115 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 DIRC3C9JPN6 131 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 SERF1AO75920 110 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 CRIP2P52943 208 aaPredicted RBP13.14□□□□□ -0.31
GAPDH-201ENST00000229239 FAM162BQ5T6X4 162 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
GAPDH-201ENST00000229239 SGK494Q96LW2 274 aa13.14□□□□□ -0.31
GAPDH-201ENST00000229239 FOXA3P55318 350 aaPredicted RBP13.13□□□□□ -0.31
GAPDH-201ENST00000229239 ATP5J2P56134 94 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 HBBP68871 147 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 ECSCRQ19T08 205 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 PRNTQ86SH4 94 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 KRTAP1-3Q8IUG1 177 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 GNB4Q9HAV0 340 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
GAPDH-201ENST00000229239 RHOGP84095 191 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 Q5PR19 223 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 Q6AWC8 147 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 EEF1AKMT3Q96AZ1 226 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 C17orf77Q96MU5 243 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 ZFHX3Q15911 3703 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 NUPR1O60356 82 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 LINC00322Q6ZN03 302 aaPredicted RBP13.12□□□□□ -0.31
GAPDH-201ENST00000229239 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
GAPDH-201ENST00000229239 A0A1B0GUS0 222 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 A0A1B0GW15 77 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 BRI3O95415 125 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 PAX1P15863 534 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 SRIP30626 198 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 LINC00310P59036 64 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 KLF5Q13887 457 aaPredicted RBP13.11□□□□□ -0.31
GAPDH-201ENST00000229239 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 C1orf194Q5T5A4 169 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 CYB5R2Q6BCY4 276 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 PRSS57Q6UWY2 283 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 COX8CQ7Z4L0 72 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 SIGLECL1Q8N7X8 197 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms