RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 HIST1H2BCP62807 126 aa12.14□□□□□ -0.47
UBR5-201ENST00000220959 HIST2H2BEQ16778 126 aa12.14□□□□□ -0.47
UBR5-201ENST00000220959 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.14□□□□□ -0.47
UBR5-201ENST00000220959 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
UBR5-201ENST00000220959 HIST1H2BHQ93079 126 aa12.14□□□□□ -0.47
UBR5-201ENST00000220959 HIST1H2BNQ99877 126 aa12.14□□□□□ -0.47
UBR5-201ENST00000220959 HIST1H2BMQ99879 126 aa12.14□□□□□ -0.47
UBR5-201ENST00000220959 RSPO3Q9BXY4 272 aaPredicted RBP12.14□□□□□ -0.47
UBR5-201ENST00000220959 SRSF3P84103 164 aaKnown RBP12.13□□□□□ -0.47
UBR5-201ENST00000220959 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
UBR5-201ENST00000220959 ROS1P08922 2347 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 SAA4P35542 130 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 AGMATQ9BSE5 352 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 LAIR2Q6ISS4 152 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 XIRP1Q702N8 1843 aaKnown RBP12.13□□□□□ -0.47
UBR5-201ENST00000220959 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
UBR5-201ENST00000220959 ATRAIDQ6UW56 229 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 APOC4P55056 127 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 THAP8Q8NA92 274 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
UBR5-201ENST00000220959 COL24A1Q17RW2 1714 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 ZMAT4Q9H898 229 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 NTN3O00634 580 aaPredicted RBP12.13□□□□□ -0.47
UBR5-201ENST00000220959 IGFL4Q6B9Z1 124 aa12.13□□□□□ -0.47
UBR5-201ENST00000220959 hDV102S1A0JD36 115 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 RNF223E7ERA6 249 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 NABP1Q96AH0 204 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 PTPRDP23468 1912 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 MMP23AO75900 390 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 PMVKQ15126 192 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 SOCS3O14543 225 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 CD177Q8N6Q3 437 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 RMI2Q96E14 147 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 NAA38Q9BRA0 125 aaKnown RBP12.12□□□□□ -0.47
UBR5-201ENST00000220959 GATA4P43694 442 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 TMEM242Q9NWH2 141 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 GATA3P23771 443 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 XCL2Q9UBD3 114 aa12.12□□□□□ -0.47
UBR5-201ENST00000220959 GGNQ86UU5 652 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 TNCP24821 2201 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 A0A087X0K7 114 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 CD5LO43866 347 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 C9JAW5 83 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 VWCEQ96DN2 955 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 LINC01619G3V211 115 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
UBR5-201ENST00000220959 GAGE12JA6NER3 117 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 GAGE1Q13065 139 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 GAGE4Q13068 117 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 GAGE5Q13069 117 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
UBR5-201ENST00000220959 EML6Q6ZMW3 1958 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 CRYGSP22914 178 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 PAQR4Q8N4S7 273 aaPredicted RBP12.1□□□□□ -0.47
UBR5-201ENST00000220959 TAL2Q16559 108 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 DKK1O94907 266 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 AZU1P20160 251 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 FOXG1P55316 489 aaPredicted RBP12.1□□□□□ -0.47
UBR5-201ENST00000220959 CHAC1Q9BUX1 264 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 IGKV1-12A0A0C4DH73 117 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 IGKV1D-12P01611 117 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 COL8A2P25067 703 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 PFN2P35080 140 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 IL17RELQ6ZVW7 336 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 FAM110DQ8TAY7 271 aaPredicted RBP12.1□□□□□ -0.47
UBR5-201ENST00000220959 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
UBR5-201ENST00000220959 GAFA1Q96PS6 74 aa12.1□□□□□ -0.47
UBR5-201ENST00000220959 TSC2P49815 1807 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 MSMBP08118 114 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 RHODO00212 210 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 IGHV3-16A0A0C4DH30 117 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 H0YIZ8 118 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 ARMS2P0C7Q2 107 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 OVOL3O00110 214 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 POU2AF1Q16633 256 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 Q96MF0 132 aa12.09□□□□□ -0.47
UBR5-201ENST00000220959 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
UBR5-201ENST00000220959 PRR31Q5SQ13 230 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
UBR5-201ENST00000220959 SPINK13Q1W4C9 94 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 KNCNA6PVL3 124 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 LY6G6FQ5SQ64 297 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 GLRX5Q86SX6 157 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 ARHGAP21Q5T5U3 1957 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 UBE2CO00762 179 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
UBR5-201ENST00000220959 LYPD2Q6UXB3 125 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 HCFC1P51610 2035 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 C22orf46C9J442 243 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
UBR5-201ENST00000220959 TRBV24-1A0A075B6N3 115 aa12.07□□□□□ -0.48
UBR5-201ENST00000220959 CT83Q5H943 113 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms