RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 RITA1Q96K30 269 aa10.48□□□□□ -0.73
HDAC7-201ENST00000080059 SNAI2O43623 268 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 TOMM40O96008 361 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 RNASE4P34096 147 aaKnown RBP10.47□□□□□ -0.73
HDAC7-201ENST00000080059 BRWD1-AS2P59051 145 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 PRDM13Q9H4Q3 707 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 LINC00614P0C842 121 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 ADORA2A-AS1P86434 159 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 SHANK2-AS3Q9BTD1 123 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 PRSS22Q9GZN4 317 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 VWC2Q2TAL6 325 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 SLC25A2Q9BXI2 301 aa10.47□□□□□ -0.73
HDAC7-201ENST00000080059 A0A1B0GV90 55 aa10.46□□□□□ -0.73
HDAC7-201ENST00000080059 NIT1Q86X76 327 aa10.46□□□□□ -0.73
HDAC7-201ENST00000080059 IGHV2-70DA0A0C4DH43 119 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 C7orf71A4D174 169 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 IGLC1P0CG04 106 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 ASIPP42127 132 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 SIGLEC15Q6ZMC9 328 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 SRSF8Q9BRL6 282 aaKnown RBP10.46□□□□□ -0.74
HDAC7-201ENST00000080059 C11orf1Q9H5F2 150 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 NACAE9PAV3 2078 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 A0A1W2PRX2 142 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 TSPOP30536 169 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 LCN12Q6JVE5 192 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 ODF3L1Q8IXM7 274 aa10.46□□□□□ -0.74
HDAC7-201ENST00000080059 FBLL1A6NHQ2 334 aaKnown RBP10.45□□□□□ -0.74
HDAC7-201ENST00000080059 E7EUB6 86 aa10.45□□□□□ -0.74
HDAC7-201ENST00000080059 SRSF9Q13242 221 aaKnown RBP eCLIP10.45□□□□□ -0.74
HDAC7-201ENST00000080059 ZNF56Q15929 161 aa10.45□□□□□ -0.74
HDAC7-201ENST00000080059 ABCA12Q86UK0 2595 aa10.45□□□□□ -0.74
HDAC7-201ENST00000080059 ZNF414Q96IQ9 312 aa10.45□□□□□ -0.74
HDAC7-201ENST00000080059 SYT8Q8NBV8 401 aa10.45□□□□□ -0.74
HDAC7-201ENST00000080059 A0A1B0GW15 77 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 MSMBP08118 114 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 OR10J3Q5JRS4 329 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 VPS25Q9BRG1 176 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 ZNF138P52744 262 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 PSG3Q16557 428 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 LYZL1Q6UWQ5 148 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 CGB3P0DN86 165 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 CGB7P0DN87 165 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 Q1RN00 199 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 CR1LQ2VPA4 569 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 OR4X2Q8NGF9 303 aa10.44□□□□□ -0.74
HDAC7-201ENST00000080059 DAZAP2Q15038 168 aaPredicted RBP10.43□□□□□ -0.74
HDAC7-201ENST00000080059 TEX29Q8N6K0 151 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 Q86TA4 180 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 NCR2O95944 276 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 HERVK_113P61574 105 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 ZNF295-AS1Q8N0V1 137 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 LYPD1Q8N2G4 141 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 ITLN2Q8WWU7 325 aaPredicted RBP10.43□□□□□ -0.74
HDAC7-201ENST00000080059 TRBV7-1A0A0A6YYK4 115 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 IGHV1-69DA0A0B4J2H0 117 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 IGHV1-69P01742 117 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 CD7P09564 240 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 EVI2AP22794 236 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 DSCR9P59020 149 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 RAX2Q96IS3 184 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 TMEM160Q9NX00 188 aa10.43□□□□□ -0.74
HDAC7-201ENST00000080059 H3BVH4 76 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 IGHV2-5P01817 119 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 ZNF688P0C7X2 276 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 YPEL3P61236 119 aaPredicted RBP10.42□□□□□ -0.74
HDAC7-201ENST00000080059 SP5Q6BEB4 398 aaPredicted RBP10.42□□□□□ -0.74
HDAC7-201ENST00000080059 C8orf31Q8N9H6 132 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 FXYD5Q96DB9 178 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 JMJD1CQ15652 2540 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 TRBV19A0A075B6N1 114 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 SCGB1C2P0DMR2 95 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 NDUFAF3Q9BU61 184 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 YAE1D1Q9NRH1 226 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 V9GYV3 84 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 OVOL3O00110 214 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 FAM120AOSQ5T036 256 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 C12orf54Q6X4T0 127 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 C11orf52Q96A22 123 aa10.42□□□□□ -0.74
HDAC7-201ENST00000080059 SH2D1AO60880 128 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 C1orf229Q6ZS94 237 aaPredicted RBP10.41□□□□□ -0.74
HDAC7-201ENST00000080059 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 ZMAT5Q9UDW3 170 aaKnown RBP10.41□□□□□ -0.74
HDAC7-201ENST00000080059 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 IGLV1-47P01700 117 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 ERCC8Q13216 396 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 THAP8Q8NA92 274 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 FAM110DQ8TAY7 271 aaPredicted RBP10.41□□□□□ -0.74
HDAC7-201ENST00000080059 A6NDN8 102 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 D6R8Y8 96 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 P0C879 139 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 GCSHP23434 173 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 FXYD7P58549 80 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 PSMG4Q5JS54 123 aa10.41□□□□□ -0.74
HDAC7-201ENST00000080059 ZNF491Q8N8L2 437 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms