RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 FBLL1A6NHQ2 334 aaKnown RBP6.44□□□□□ -1.38
VAMP3-201ENST00000054666 SH2D7A6NKC9 451 aaPredicted RBP6.44□□□□□ -1.38
VAMP3-201ENST00000054666 VWC2LB2RUY7 222 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 G3V318 75 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 M0R3E3 92 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 CTAG1AP78358 180 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 DEFA6Q01524 100 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 KLK9Q2XQG4 91 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 BCL6BQ8N143 479 aaPredicted RBP6.44□□□□□ -1.38
VAMP3-201ENST00000054666 PGLYRP4Q96LB8 373 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 NAGKQ9UJ70 344 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 KLK9Q9UKQ9 250 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 TRAV41A0A0B4J266 112 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 IGHV3-35A0A0C4DH35 117 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 A0A1B0GXF2 115 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 F2Z2F3 143 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 CLEC3BP05452 202 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 MSMBP08118 114 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 AMTP48728 403 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 DSCR9P59020 149 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 LINC00310P59036 64 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 RELQ04864 619 aaPredicted RBP6.44□□□□□ -1.38
VAMP3-201ENST00000054666 CLEC19AQ6UXS0 136 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 ARL6IP6Q8N6S5 226 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 ZC2HC1AQ96GY0 325 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 PRO1933Q9H354 126 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 FAM223BA6NKX1 122 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF705FA8MVS1 300 aaPredicted RBP6.43□□□□□ -1.38
VAMP3-201ENST00000054666 CHEK1O14757 476 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF705DP0CH99 300 aaPredicted RBP6.43□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF705BP0CI00 300 aaPredicted RBP6.43□□□□□ -1.38
VAMP3-201ENST00000054666 PMCHP20382 165 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 ATP5G2Q06055 141 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 TOMM20LQ6UXN7 152 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 FAM223AQ8IWN6 122 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 GTSF1Q8WW33 167 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 BORCS7Q96B45 105 aa6.43□□□□□ -1.38
VAMP3-201ENST00000054666 NOL4LQ96MY1 436 aaPredicted RBP6.43□□□□□ -1.38
VAMP3-201ENST00000054666 SSBP4Q9BWG4 385 aaPredicted RBP6.43□□□□□ -1.38
VAMP3-201ENST00000054666 IGHV3OR16-8A0A075B7F1 116 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF785A8K8V0 405 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF324O75467 553 aaPredicted RBP6.42□□□□□ -1.38
VAMP3-201ENST00000054666 IGHV4-38-2P0DP08 117 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 DDTP30046 118 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 FAM162BQ5T6X4 162 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 Q6AWC8 147 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 Q6ZWC4 215 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 C18orf32Q8TCD1 76 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 CCDC140Q96MF4 163 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 METTL26Q96S19 204 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 MEGF9Q9H1U4 602 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 ZFAND3Q9H8U3 227 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 ABCA2Q9BZC7 2435 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 TACC2O95359 2948 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 SPTAN1Q13813 2472 aaKnown RBP6.42□□□□□ -1.38
VAMP3-201ENST00000054666 B4DSR2 109 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 M0QZK8 103 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 CRIP2P52943 208 aaPredicted RBP6.42□□□□□ -1.38
VAMP3-201ENST00000054666 SAPCD1Q5SSQ6 148 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 GDF5OSQ5U4N7 250 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 RCHY1Q96PM5 261 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 ATP6V0BQ99437 205 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 SLC50A1Q9BRV3 221 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 NDFIP1Q9BT67 221 aa6.42□□□□□ -1.38
VAMP3-201ENST00000054666 DOPEY1Q5JWR5 2465 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 IGKV2-40A0A087WW87 121 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-201ENST00000054666 A0A087X0K7 114 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 LINC01548A6NM66 108 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 HSBP1O75506 76 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 IGKV2D-40P01614 121 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-201ENST00000054666 TRGV3P03979 118 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 GPX1P07203 203 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 RNF224P0DH78 156 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 COX6B1P14854 86 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 SLC25A16P16260 332 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 GATA3P23771 443 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 RIGQ13278 110 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 KLF5Q13887 457 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-201ENST00000054666 LY6EQ16553 131 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 C16orf54Q6UWD8 224 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF664Q8N3J9 261 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 CACNA1BQ00975 2339 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 A0A1B0GUT8 65 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 A0A1B0GW15 77 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 A0A1W2PS18 150 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 A8MWP6 167 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 H3BUX3 64 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 BUB3O43684 328 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 NTF3P20783 257 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 KRTDAPP60985 99 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 FAM209BQ5JX69 171 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 C1orf194Q5T5A4 169 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 RNASEKQ6P5S7 137 aaKnown RBP6.41□□□□□ -1.38
VAMP3-201ENST00000054666 C8orf49Q96NF6 230 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 ASCL2Q99929 193 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 ALKBH7Q9BT30 221 aaPredicted RBP6.41□□□□□ -1.38
VAMP3-201ENST00000054666 HIF1ANQ9NWT6 349 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 ACACBO00763 2458 aa6.41□□□□□ -1.38
VAMP3-201ENST00000054666 PRB4P10163 310 aaPredicted RBP6.4□□□□□ -1.38
VAMP3-201ENST00000054666 FOXA3P55318 350 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms