RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Olfr1328B1ARV2 313 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Rpl27aP14115 148 aaKnown RBP13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Dlx1Q64317 255 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Habp2Q8K0D2 558 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr123Q8VFQ1 309 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Mrpl33Q9CQP0 65 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Ctag2Q9D9S4 219 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Xlr5cQ9JJR2 179 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Igkv1-133A0A0B4J1H8 120 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 MdkP12025 140 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Vdac1Q60932 296 aaKnown RBP13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Znf250Q7TNU6 535 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr1181Q7TR18 311 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Bles03Q8VD62 251 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 4930412O13RikQ9D5M9 106 aa13.35□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Ighv9-2A0A0B4J1J4 117 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Slc25a53A2AF28 346 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Cdkn1bP46414 197 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 NcanP55066 1268 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Tbx19Q99ME7 446 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Cryba2Q9JJV1 197 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Gm21732J3QM79 361 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Gm21921J3QNB5 361 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Tlcd2Q8VC26 310 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Rasl11bQ922H7 247 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Gm45753A0A1C7CYU8 86 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr747E9PXH6 313 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Defa9P50707 93 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Mrgprb2Q3KNA1 338 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr593Q8VF28 327 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr1009Q8VFK1 314 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Chchd1Q9CQA6 118 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Lurap1Q9D6I9 239 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Vmn1r46Q9EQ45 309 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Gm10439A2AJU2 433 aaKnown RBP13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Gm15114B1B0X6 433 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 FetubQ9QXC1 388 aa13.34□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Gm5157A0A087WRH8 301 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 LfngO09010 378 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 BokO35425 213 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Slc35b1P97858 322 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 MlanaQ2TA50 113 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr365Q8VFT2 312 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr926Q9EQ98 308 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Olfr894Q9EQB2 313 aa13.33□□□□□ -0.27
Pcdha9-201ENSMUST00000115659 Dock5B2RY04 1868 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Rtl4Q3URY0 304 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Smim9Q3V0X1 137 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Tmprss5Q9ER04 455 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Wnt16Q9QYS1 364 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Zfp111Q9R164 701 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 2410004P03RikA0A087WQY2 205 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 BC024063A0A1W2P7G7 749 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm21976J3QNN2 249 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 S100a8P27005 89 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Cd52Q64389 74 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Pbp2Q8VIN1 187 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Tmem42Q9CR22 157 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Defa-rs1P17533 116 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Tff1Q08423 87 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Ifna11Q61716 190 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Olfr875Q7TRE5 310 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 D1Ertd622eQ8VEB3 207 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Olfr530Q8VFE8 307 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 PpifQ99KR7 206 aaKnown RBP13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Smim8Q9CQQ0 97 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Egr4Q9WUF2 478 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 9930021J03RikH3BKP8 2027 aa13.33□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm20773A0A0A6YXW2 232 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm20807A0A0A6YXX7 232 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Lbhd2G3UW55 114 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm20873J3QMQ9 232 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm20795J3QP49 232 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm21440Q3TTD8 232 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Pcgf1Q8R023 259 aaKnown RBP13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Ntn3Q9R1A3 580 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 OdamA1E960 273 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Nat8f4G5E8L3 226 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 P01759 136 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 NrtnP97463 195 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Mlf1Q9QWV4 267 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 PikfyveQ9Z1T6 2097 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Zgrf1Q0VGT4 1863 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Lnp1A0A1B0GSK3 178 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Rnf212F6TQD1 307 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Aqp7O54794 303 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Rps20P60867 119 aaKnown RBP13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Khdc1aQ3UWR2 166 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Ly75Q60767 1723 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Olfr1189A2AV11 306 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm4788E9Q8B5 879 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm9733Q1AN91 178 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Zfp119bQ8K0G9 543 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 D730048I06RikQ9CQB8 106 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Gm12728V9GX31 77 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Igkv9-124A0A0G2JDR3 117 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Tnfsf12O54907 249 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Ubald1Q6P3B2 176 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Tctn3Q8R2Q6 595 aa13.32□□□□□ -0.28
Pcdha9-201ENSMUST00000115659 Prr30Q9D9B7 401 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms