RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Trav17A0A075B655 113 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm10778A0A087WNP5 499 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ins2P01326 110 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Pnliprp2P17892 482 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ucp2P70406 309 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Npas1P97459 594 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr25Q7TRD6 313 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Vmn1r230Q8R2A2 316 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 SmpxQ9DC77 85 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 SelenofQ9ERR7 162 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Trem3Q9JKE1 183 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Sema7aQ9QUR8 664 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Cd200r3Q5UKY4 296 aa10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 AgerQ62151 402 aa10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Nhlh2Q64221 135 aa10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr641Q8VGX6 312 aa10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Uqcc1Q9CWU6 295 aa10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ccl28Q9JIL2 130 aa10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Col24a1Q30D77 1733 aa10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ckap5A2AGT5 2032 aaKnown RBP10.02□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Spta1P08032 2415 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr175-ps1A0A140T8K4 308 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mfge8P21956 463 aaKnown RBP10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Spint3Q3UW09 88 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr16Q62007 309 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr987Q7TRA2 309 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1259Q8VEZ1 309 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Zcchc24B2RVL6 241 aaKnown RBP10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 H2-Ab1P01921 265 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Fam222bQ6P539 562 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr816Q8VFU2 312 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ppp1r1aQ9ERT9 171 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm20422E9PUR3 255 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rabl2E9Q9D5 223 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pax6P63015 422 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gcm1P70348 436 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rhox4gQ2MDF7 205 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rhox4dQ2MDG0 205 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rhox4eQ504P9 205 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rhox4bQ9JI43 205 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Atoh7Q9Z2E5 149 aa10.02□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Acsm5Q8BGA8 578 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1350Q8VF34 308 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Q9DAL9 119 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Vax2Q9WTP9 292 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Bcl2l10Q9Z0F3 191 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Scn2aA0A0J9YTW6 2006 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Col5a3Q9JLI2 1739 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ctxnd1A0A1B0GST9 59 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rpl29P47915 160 aaKnown RBP10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pax5Q02650 391 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr917Q7TRC3 309 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1448Q8VFX1 314 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mgst1Q91VS7 155 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ufc1Q9CR09 167 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr432E9Q8M2 312 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ccr6O54689 367 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 GrnP28798 589 aaKnown RBP10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gsx2P31316 305 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Aadacl4Q8BM81 407 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Mbnl3Q8R003 342 aaKnown RBP10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Q8VE95 218 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr303Q8VFP0 319 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gar1Q9CY66 231 aaKnown RBP10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ints1Q6P4S8 2195 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rps2-ps6A0A140T8L5 221 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr466E9Q2B9 308 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Spint5J3KMK8 105 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cbln4Q8BME9 198 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Phf13Q8K2W6 296 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Vmn1r202Q8R259 302 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Nup35Q8R4R6 325 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Zfand6Q9DCH6 223 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cml1Q9JIZ0 222 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Hsbp1l1B2RXB2 72 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm21244J3QK38 227 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1383Q7TQT2 311 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Pgam5Q8BX10 288 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Rhbdd2Q8VEK2 361 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr1030Q8VFL5 318 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Q91WE4 72 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Ndufa11Q9D8B4 141 aa10.01□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Anapc1P53995 1944 aaKnown RBP10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr918E9PVZ7 325 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Tmem139E9PX92 214 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr978E9Q985 311 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Evi2aP20934 223 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cd200r5Q8BTP3 270 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm14412A2ARR7 526 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 V1rd19Q3KNP5 305 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Arg1Q61176 323 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Klk15Q8CGR4 254 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Tmem208Q9CR96 173 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 DeddQ9Z1L3 318 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gm5108J3QP01 101 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Cxcl13O55038 109 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 P01680 129 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Gimap1P70224 277 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 HaaoQ78JT3 286 aa10□□□□□ -0.81
Pcif1-201ENSMUST00000041643 Olfr476Q8VGI4 310 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms