RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Cd200r5Q8BTP3 270 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Tmem116A0A0G2JGD3 401 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Samt3A2ARK7 233 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gpm6bP35803 328 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Q5BN45 167 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ascc3E9PZJ8 2198 aaKnown RBP8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 P06323 132 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gimap1P70224 277 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr904Q7TRC9 310 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 PirtQ8BFY0 135 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Tmem97Q8VD00 176 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Bles03Q8VD62 251 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm45753A0A1C7CYU8 86 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm10439A2AJU2 433 aaKnown RBP8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm15114B1B0X6 433 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm16442D3YZG3 307 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm6594J3QM43 95 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Lcn2P11672 200 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Psg27Q497W2 474 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Klf2Q60843 354 aaKnown RBP8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr150Q60895 312 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 SprnQ8BWU1 147 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Poc1aQ8JZX3 405 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr1030Q8VFL5 318 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Chchd2Q9D1L0 153 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm12355A2A4X6 163 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Zfp108E9Q8I5 642 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm20532G3UXR8 106 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 P01806 116 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Srsf3P84104 164 aaKnown RBP8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Spink11Q09TK7 88 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Duxbl2Q7TNE6 350 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Tmem108Q8BHE4 574 aa8.75□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Trav6d-5A0A075B6B9 112 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Tstd1E9PY03 133 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Sc5dO88822 299 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Meox1P32442 253 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Pmis2Q497Q9 96 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Sox21Q811W0 276 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ldlrad2Q3V0V0 142 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Dlx1Q64317 255 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ly96Q9JHF9 160 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Cbln1Q9R171 193 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ccdc188F6WEU2 249 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm21732J3QM79 361 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm21921J3QNB5 361 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ceacam9Q78T27 234 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ovol2Q8CIV7 274 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Shisal2bQ9D1Y9 158 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm42543A0A0G2JET4 117 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Grem1O70326 184 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gabrg3P27681 467 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 BsxQ810B3 232 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Pef1Q8BFY6 275 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Negr1Q80Z24 348 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Slc24a5Q8C261 501 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr127Q8VF25 323 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Paqr4Q9JJE4 273 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Trbv1A0A0B4J1G7 116 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Igkv9-124A0A0G2JDR3 117 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Zfp433A0A0J9YUD4 600 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm32687A0A1W2P6H7 600 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Esp23A8R0V5 104 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Bsph2Q0Q236 131 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Rtl4Q3URY0 304 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr1243Q8VGM7 305 aa8.74□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Trav5-1A0A075B5Z7 114 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Trav6n-5A0A075B621 112 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Trav6-5A0A075B6B5 112 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Plcxd2B2RXA1 340 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Psmg4P0C7N9 123 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Defb7Q91V70 71 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Cdx4Q07424 282 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Crispld2Q8BZQ2 495 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 MrgprgQ91ZB5 289 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Dock5B2RY04 1868 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ighv9-1A0A0B4J1P3 117 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr175-ps1A0A140T8K4 308 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Tgfbr3lD3YZZ2 297 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm10036E9PYL9 178 aaKnown RBP8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 StradbQ8K4T3 418 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Mdp1Q9D967 164 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Esp4A8R0T8 117 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Rps20P60867 119 aaKnown RBP8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Nxph1Q61200 271 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Znf385aQ8VD12 386 aaKnown RBP8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr223Q8VF69 319 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Igkv10-95A0A0G2JFY3 115 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Rpl23P62830 140 aaKnown RBP8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Ndufs8Q8K3J1 212 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr481Q8VGI5 312 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Vgll1Q99NC0 307 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Spta1P08032 2415 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Nabp1Q8BGW5 198 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Olfr1443Q8VFW8 312 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 LbhQ9CX60 105 aa8.73□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm38303A0A0A6YWW8 100 aa8.72□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Igkv15-103A0A140T8P3 115 aa8.72□□□□□ -1.01
Ubr1-201ENSMUST00000028728 Gm35315A0A1B0GRI2 571 aa8.72□□□□□ -1.01
Ubr1-201ENSMUST00000028728 TbpP29037 316 aa8.72□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms