RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 BC147527Q3V185 167 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Usf2Q64705 346 aaKnown RBP15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Cdc42ep2Q8JZX9 214 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Vmn1r70Q8R254 298 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Mrps36Q9CQX8 102 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Cd200r1Q9ES57 326 aa15.63■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Dchs1E9PVD3 3291 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Zfp971A2BFG8 470 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm14288E9Q9W0 88 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Syngr2O55101 224 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Pfn1P62962 140 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gfod1Q3UHD2 390 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Ctsll3Q3ULP7 331 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr1362Q5SZZ8 308 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Spred3Q6P6N5 408 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Tm2d1Q99MB3 208 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Ms4a4cQ9D3F6 226 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Cox20Q9D7J4 117 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Scp2d1Q9DAH1 156 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Igkv6-15A0A140T8M5 115 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Inafm1E9PV59 130 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm20532G3UXR8 106 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 P01659 112 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Csn2P10598 231 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Tnfrsf1aP25118 454 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gnb2P62880 340 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Wnt10aP70701 417 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Zfp970Q08BU3 522 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Zfp72Q0VFY0 435 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Ube2zQ3UE37 356 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm10840Q3V2K9 103 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Taar9Q5QD04 348 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Nhlh2Q64221 135 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 NracQ8BNX7 165 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Fancd2osQ9D4K4 178 aa15.62■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Iglv3A0A0B4J1K5 122 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm14443A2ARX0 610 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Rhox4gQ2MDF7 205 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Rhox4dQ2MDG0 205 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Rhox4eQ504P9 205 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr924Q7TRB8 308 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 BsxQ810B3 232 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Sfxn4Q925N1 313 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Rhox4bQ9JI43 205 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr284A0A0U1RP76 321 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Zfp972A2AW65 139 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm21834J3QN05 151 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 LalbaP29752 143 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 StomP54116 284 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Nkpd1Q0VF94 599 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 TpppQ7TQD2 218 aaKnown RBP15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Tox3Q80W03 575 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Ssmem1Q9D9Y8 244 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Dctn5Q9QZB9 182 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Vsig2Q9Z109 328 aa15.61■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr753-ps1A0A140LHN3 164 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Lnp1A0A1B0GSK3 178 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 HrasQ61411 189 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Rab11fip5Q8R361 645 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm4884E9PVP9 694 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Bmpr1bP36898 502 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 ApohQ01339 345 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 GfralQ6SJE0 393 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Cdc34Q8CFI2 235 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Fbxo24Q9D417 589 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Timm8a1Q9WVA2 97 aa15.6■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Olfr1104A2AVB5 310 aa15.59■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gstp1P19157 210 aa15.59■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Wdr83osQ6ZWX0 106 aa15.59■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Znhit1Q8R331 154 aa15.59■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Ndufb10Q9DCS9 176 aa15.59■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Mbnl1Q9JKP5 341 aaKnown RBP15.59■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm14412A2ARR7 526 aa15.58■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Gm2381G3UY53 305 aa15.58■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Nkx2-8O70584 235 aa15.58■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Tubg1P83887 451 aaKnown RBP15.58■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Cnep1r1Q3UJ81 125 aa15.58■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Sp9Q64HY3 484 aa15.58■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Anapc16Q9CPV2 110 aa15.58■□□□□ 0.09
Shkbp1-201ENSMUST00000003857 Ighv9-2A0A0B4J1J4 117 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 A0A286YDM5 308 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Vmn1r113G3UWI8 307 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Neurog3P70661 214 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Reg2Q08731 173 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Olfr641Q8VGX6 312 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 CstadQ9D245 104 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Cmtm2bQ9DAC0 210 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Mad2l1bpQ9DCX1 276 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Trem3Q9JKE1 183 aa15.58■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Trav5-4A0A075B652 114 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 E430018J23RikE9PZQ8 461 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 G430049J08RikQ3TL09 166 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Tmem40Q4FJU9 225 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Q8CF25 301 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 A0A1L1SR50 188 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Pde6dO55057 150 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 RhodP97348 210 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Zfp936Q3ULA8 456 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 Xaf1Q5NBU8 273 aa15.57■□□□□ 0.08
Shkbp1-201ENSMUST00000003857 NotoQ5TIS6 240 aa15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 63.1 ms