RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 FOXA3P55318 350 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-210ENST00000640652 CBY3A6NI87 242 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 CLEC3BP05452 202 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 MUC15Q8N387 334 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 SELLP14151 372 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 Q86TA4 180 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 OR1N2Q8NGR9 330 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 C3orf79P0CE67 100 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 FCGR2BP31994 310 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-210ENST00000640652 RPL11P62913 178 aaKnown RBP4.51□□□□□ -1.69
SCN3A-210ENST00000640652 FAM27E3Q08E93 113 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 GUSBP1Q15486 140 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 ARPC1AQ92747 370 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 PPP1R17O96001 155 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 ARF6P62330 175 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 FXYD5Q96DB9 178 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 IGF2BP2-AS1Q96M15 143 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 LOC102724200A0A096LPH7 203 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-210ENST00000640652 LTAP01374 205 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 CCL3L1P16619 93 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 RELQ04864 619 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-210ENST00000640652 IGFL2Q6UWQ7 119 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 SGK494Q96LW2 274 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 IGHV3-72A0A0B4J1Y9 119 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 LOC389332A0A1B0GUA5 103 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM238LA0A1B0GVL6 79 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 A6NJY4 79 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 APOHP02749 345 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-210ENST00000640652 DPM3Q9P2X0 92 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 BOD1L1Q8NFC6 3051 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM78Q5T7P6 136 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 KAAG1Q9UBP8 84 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 FBXL7Q9UJT9 491 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 COX11Q9Y6N1 276 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 A0A1B0GWJ7 208 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 NUDT3O95989 172 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 NMUP48645 174 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 F11RQ9Y624 299 aaKnown RBP4.5□□□□□ -1.69
SCN3A-210ENST00000640652 UCNP55089 124 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 OR9G4Q8NGQ1 327 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 PRELID3AQ96N28 172 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 SIGLEC9Q9Y336 463 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 EPG5Q9HCE0 2579 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 FAM90A27PA6NNH2 459 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 PRSS46E5RG02 174 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 BUB1B-PAK6H3BSN5 160 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 PRSS1P07477 247 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 PSG1P11464 419 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 S100A4P26447 101 aaKnown RBP4.5□□□□□ -1.69
SCN3A-210ENST00000640652 WT1-ASQ06250 92 aa4.5□□□□□ -1.69
SCN3A-210ENST00000640652 TRAV5A0A0B4J249 113 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 HBDP02042 147 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 NXT2Q9NPJ8 142 aaKnown RBP4.49□□□□□ -1.69
SCN3A-210ENST00000640652 C21orf62Q9NYP8 219 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 HILPDAQ9Y5L2 63 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 F2Z2F3 143 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 PSG3Q16557 428 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 OR4X2Q8NGF9 303 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 MYOZ3Q8TDC0 251 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 RNASE6Q93091 150 aaKnown RBP4.49□□□□□ -1.69
SCN3A-210ENST00000640652 RCHY1Q96PM5 261 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 IGHV1-3A0A0C4DH29 117 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 A6NNC1 897 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 HAX1O00165 279 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 ECSCRQ19T08 205 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 SP5Q6BEB4 398 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-210ENST00000640652 Q6ZS92 163 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 IGLC2P0DOY2 106 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 IGLC3P0DOY3 106 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 UBE2V1Q13404 147 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 FBLN7Q53RD9 439 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 SAMD13Q5VXD3 122 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 ERASQ7Z444 233 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 A1L4Q6 167 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 FAM53AQ6NSI3 398 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-210ENST00000640652 LOC105371242A0A075B767 164 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 CD33P20138 364 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 PCP4P48539 62 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM155Q4W5P6 130 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 RPRMLQ8N4K4 120 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 FLNCQ14315 2725 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 CEACAM4O75871 244 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 GPR183P32249 361 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 SHANK2-AS3Q9BTD1 123 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 FBXL15Q9H469 300 aa4.49□□□□□ -1.69
SCN3A-210ENST00000640652 UNQ6494/PRO21346Q6UXR6 183 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 CLEC5AQ9NY25 188 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 NOTCH2Q04721 2471 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 A0A0G2JNJ9 132 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 SRRM4A7MD48 611 aaKnown RBP4.48□□□□□ -1.69
SCN3A-210ENST00000640652 ATP5LO75964 103 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 NPPCP23582 126 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 ASCL2Q99929 193 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 Q9UFV3 132 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 OR2T8A6NH00 312 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 M0R1W7 72 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 PIP4P1Q86T03 277 aa4.48□□□□□ -1.69
SCN3A-210ENST00000640652 EXOC3-AS1Q8N2X6 119 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms