RNA–Protein interactions for RNA: ENST00000637500.1

TCF4-287, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-287	ENST00000637500	ISOC1	Q96CN7	298 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	ZNF714	Q96N38	554 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	PRADC1	Q9BSG0	188 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	MS4A6A	Q9H2W1	248 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	ENPP5	Q9UJA9	477 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	C3orf18	Q9UK00	162 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	SPTBN4	Q9H254	2564 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	HECW1	Q76N89	1606 aa		-2.64	□□□□□ -2.83
TCF4-287	ENST00000637500	MYH9	P35579	1960 aa	Known RBP	-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	GVQW2	A0A096LPI5	108 aa	Predicted RBP	-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	LOC101927531	A0A1B0GV80	90 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500		F2Z2F3	143 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	PTMA	P06454	111 aa	Known RBP	-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	PVALB	P20472	110 aa	Predicted RBP	-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	YPEL3	P61236	119 aa	Predicted RBP	-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	VBP1	P61758	197 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	SNCB	Q16143	134 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	FAM45BP	Q6NSW5	357 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	TOMM6	Q96B49	74 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	PACRG	Q96M98	296 aa	Predicted RBP	-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	DERL2	Q9GZP9	239 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	ASCL3	Q9NQ33	180 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	USF3	Q68DE3	2245 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	LAMA3	Q16787	3333 aa		-2.65	□□□□□ -2.83
TCF4-287	ENST00000637500	HECW2	Q9P2P5	1572 aa		-2.66	□□□□□ -2.83
TCF4-287	ENST00000637500	TRAV27	A0A087WT01	109 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500		A0A087X0T9	212 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500		A0A0G2JMM0	328 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	GOLGA6L7	A0A1B0GV03	622 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500		A0A1W2PPB8	328 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	C9orf170	A2RU37	121 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	DPRX	A6NFQ7	191 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	KIR3DP1	A8MWS1	328 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500		A8MWV9	139 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	CST4	P01036	141 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	HLA-DRA	P01903	254 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	SLC35E2B	P0CK96	405 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	C18orf21	Q32NC0	220 aa	Predicted RBP	-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	KLK6	Q92876	244 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	RBP7	Q96R05	134 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	DSCR8	Q96T75	97 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	FBXL12	Q9NXK8	326 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	MRPL35	Q9NZE8	188 aa	Known RBP	-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	NEO1	Q92859	1461 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	AKAP9	Q99996	3911 aa		-2.66	□□□□□ -2.84
TCF4-287	ENST00000637500	DSPP	Q9NZW4	1301 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	PIAS1	O75925	651 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	SNX4	O95219	450 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	TNFAIP8	O95379	198 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	COQ5	Q5HYK3	327 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	TMEM161B	Q8NDZ6	487 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	OR51I2	Q9H344	312 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	C11orf68	Q9H3H3	251 aa	Known RBP	-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	MRM2	Q9UI43	246 aa	Known RBP	-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	SPG11	Q96JI7	2443 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	IQSEC2	Q5JU85	1478 aa		-2.67	□□□□□ -2.84
TCF4-287	ENST00000637500	VIRMA	Q69YN4	1812 aa	Known RBP	-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	TRPM7	Q96QT4	1865 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	BICRA	Q9NZM4	1560 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	CCDC169	A6NNP5	214 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	C17orf112	F2Z3M2	114 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	MKRN2OS	H3BPM6	223 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	IL3	P08700	152 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	STAG3L3	P0CL85	134 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	ATP5G3	P48201	142 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	TMCO2	Q7Z6W1	182 aa	Predicted RBP	-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	FUNDC1	Q8IVP5	155 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	DKKL1	Q9UK85	242 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	CUBN	O60494	3623 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	KIF27	Q86VH2	1401 aa		-2.68	□□□□□ -2.84
TCF4-287	ENST00000637500	USP9X	Q93008	2570 aa	Predicted RBP	-2.69	□□□□□ -2.84
TCF4-287	ENST00000637500	ZNF815P	A8K554	130 aa		-2.69	□□□□□ -2.84
TCF4-287	ENST00000637500	S100A4	P26447	101 aa	Known RBP	-2.69	□□□□□ -2.84
TCF4-287	ENST00000637500	MIR22HG	Q0VDD5	57 aa		-2.69	□□□□□ -2.84
TCF4-287	ENST00000637500	STK38	Q15208	465 aa		-2.69	□□□□□ -2.84
TCF4-287	ENST00000637500	DNAL1	Q4LDG9	190 aa		-2.69	□□□□□ -2.84
TCF4-287	ENST00000637500	SSBP3-AS1	Q7Z2R9	100 aa		-2.69	□□□□□ -2.84
TCF4-287	ENST00000637500	TGOLN2	O43493	480 aa		-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	SPAG11A	Q6PDA7	123 aa		-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	POP5	Q969H6	163 aa	Known RBP	-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	DIRAS2	Q96HU8	199 aa		-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	SERPINB11	Q96P15	392 aa		-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	DNAH9	Q9NYC9	4486 aa		-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	BLM	P54132	1417 aa	Predicted RBP	-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	RREB1	Q92766	1687 aa		-2.7	□□□□□ -2.84
TCF4-287	ENST00000637500	HELZ	P42694	1942 aa	Known RBP	-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	EXOC1L	A0A1B0GW35	172 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	GYPB	P06028	91 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	STAG3L2	P0CL84	134 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	MARCKSL1	P49006	195 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	BOD1L2	Q8IYS8	172 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	OR52E6	Q96RD3	313 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	TMEM126A	Q9H061	195 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	FAM96A	Q9H5X1	160 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	NAT8B	Q9UHF3	227 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	ARHGAP31	Q2M1Z3	1444 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	PLXNA1	Q9UIW2	1896 aa		-2.71	□□□□□ -2.84
TCF4-287	ENST00000637500	TEX15	Q9BXT5	2789 aa		-2.72	□□□□□ -2.84
TCF4-287	ENST00000637500	CPD	O75976	1380 aa		-2.72	□□□□□ -2.84
TCF4-287	ENST00000637500		A0A096LPI6	279 aa		-2.72	□□□□□ -2.84

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms