RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 IGKCP01834 107 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 LYZL4Q96KX0 146 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 A0A0G2JNJ9 132 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 ZNF561-AS1K7EIQ3 104 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 CSRP1P21291 193 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 CFHR1Q03591 330 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 LAGE3Q14657 143 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 ORMDL2Q53FV1 153 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 Q9UFV3 132 aa13.19□□□□□ -0.3
CACNA1A-221ENST00000636012 A0A1W2PPI3 338 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 A6NNC1 897 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 TAL2Q16559 108 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 GATA4P43694 442 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 EFNA4P52798 201 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 ZNF525Q8N782 197 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 A0A096LPF7 62 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 TRAV12-2A0A075B6T6 113 aa13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 SSBP2P81877 361 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 MRPL14Q6P1L8 145 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-221ENST00000636012 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 ZNF876PQ49A33 203 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 B4DSR2 109 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 PFN2P35080 140 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 SRP19P09132 144 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 EFNB3Q15768 340 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 TEX38Q6PEX7 206 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 C5orf30Q96GV9 206 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 LINC00477Q96M19 166 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 FBLIM1Q8WUP2 373 aa13.17□□□□□ -0.3
CACNA1A-221ENST00000636012 NLRC5Q86WI3 1866 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 SIPA1L1O43166 1804 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 TIMM17AQ99595 171 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 TRBV6-7A0A0A0MS04 114 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 C14orf132Q9NPU4 83 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 SERF1AO75920 110 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 LY6HO94772 140 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 RPL23P62829 140 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 FGFBP3Q8TAT2 258 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 F5H768 121 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 C1QTNF9P0C862 333 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 C20orf204Q6ZNR8 217 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 EGR2P11161 476 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 RPL36AP83881 106 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 LINC01356Q8N9X3 169 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 RPL36ALQ969Q0 106 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 SPXQ9BT56 116 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 GAS1P54826 345 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 DKK4Q9UBT3 224 aa13.16□□□□□ -0.3
CACNA1A-221ENST00000636012 ZSWIM8A7E2V4 1837 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 CD59P13987 128 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 CCL20P78556 96 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 TMEM178BH3BS89 294 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 MMP23AO75900 390 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 SELLP14151 372 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 IGHV1-3A0A0C4DH29 117 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
CACNA1A-221ENST00000636012 SPATA25Q9BR10 227 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 RNF223E7ERA6 249 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 DNAJC30Q96LL9 226 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 RNF114Q9Y508 228 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 PRCDQ00LT1 54 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 RBM3P98179 157 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 IGHV1-8P0DP01 117 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 SS18Q15532 418 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 C8orf31Q8N9H6 132 aa13.14□□□□□ -0.31
CACNA1A-221ENST00000636012 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 IGLV3-19P01714 112 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 C1QL4Q86Z23 238 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 DSCR8Q96T75 97 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 PLSCR4Q9NRQ2 329 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 KLF17Q5JT82 389 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 WNK1Q9H4A3 2382 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 PSG1P11464 419 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 UBE2BP63146 152 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 C10orf55Q5SWW7 151 aa13.13□□□□□ -0.31
CACNA1A-221ENST00000636012 TIMP3P35625 211 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 TMEM258P61165 79 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 ATP5L2Q7Z4Y8 100 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 RPUSD1Q9UJJ7 312 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 ARHGAP32A7KAX9 2087 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 ZFP36L1Q07352 338 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 MESP1Q9BRJ9 268 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 PLXNA3P51805 1871 aa13.12□□□□□ -0.31
CACNA1A-221ENST00000636012 A0A1B0GTI1 187 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 SP5Q6BEB4 398 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 SPSB3Q6PJ21 355 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 ZNF479Q96JC4 524 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 FAM90A9PA6NNJ1 464 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 BPESC1Q9GZL8 116 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 TBX6O95947 436 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 C9JAW5 83 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms