RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 GFI1BQ5VTD9 330 aa3.57□□□□□ -1.84
LINC00649-220ENST00000628906 OR8G2PQ6IF36 304 aa3.57□□□□□ -1.84
LINC00649-220ENST00000628906 LYSMD2Q8IV50 215 aa3.57□□□□□ -1.84
LINC00649-220ENST00000628906 ZNF680Q8NEM1 530 aa3.57□□□□□ -1.84
LINC00649-220ENST00000628906 OR51G1Q8NGK1 321 aa3.57□□□□□ -1.84
LINC00649-220ENST00000628906 RRNAD1Q96FB5 475 aaKnown RBP3.57□□□□□ -1.84
LINC00649-220ENST00000628906 C2orf50Q96LR7 162 aa3.57□□□□□ -1.84
LINC00649-220ENST00000628906 TSC22D3Q99576 134 aa3.57□□□□□ -1.84
LINC00649-220ENST00000628906 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
LINC00649-220ENST00000628906 A0A075B6Q4 140 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 TRAV8-2A0A0B4J237 113 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 USP17L23D6RBM5 183 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 PFN1P07737 140 aaKnown RBP3.56□□□□□ -1.84
LINC00649-220ENST00000628906 RNASE2P10153 161 aaKnown RBP3.56□□□□□ -1.84
LINC00649-220ENST00000628906 PSG1P11464 419 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 OR10J1P30954 320 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 OPRK1P41145 380 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 TCL1AP56279 114 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 HIST1H1AQ02539 215 aaPredicted RBP3.56□□□□□ -1.84
LINC00649-220ENST00000628906 CATR1Q13166 79 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 P2RY14Q15391 338 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 ANXA2RQ3ZCQ2 193 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 IGFL4Q6B9Z1 124 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 PRSS54Q6PEW0 395 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 NOXA1Q86UR1 476 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 OR8I2Q8N0Y5 310 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 ZBTB8BQ8NAP8 495 aaPredicted RBP3.56□□□□□ -1.84
LINC00649-220ENST00000628906 INO80EQ8NBZ0 244 aaPredicted RBP3.56□□□□□ -1.84
LINC00649-220ENST00000628906 OR5H2Q8NGV7 314 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 SLC25A38Q96DW6 304 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 SMIM19Q96E16 107 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 ZNF479Q96JC4 524 aa3.56□□□□□ -1.84
LINC00649-220ENST00000628906 IGHV3-64A0A075B6Q5 118 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 IGHV1OR15-1A0A075B7D0 117 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 TRAV1-1A0A0B4J248 108 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 MUC21A0A0G2JKD1 596 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 ATG12O94817 140 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 TSPAN13O95857 204 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 SFTA3P0C7M3 94 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 G6PCP35575 357 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 SUB1P53999 127 aaKnown RBP eCLIP3.55□□□□□ -1.84
LINC00649-220ENST00000628906 RAB11BQ15907 218 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 TMEM183BQ1AE95 376 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 VWC2Q2TAL6 325 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 TMEM183AQ8IXX5 376 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 RNF182Q8N6D2 247 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 TMEM75Q8N9X5 138 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 NHLRC2Q8NBF2 726 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 BPIFB6Q8NFQ5 453 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 OR56B1Q8NGI3 324 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 OR10G4Q8NGN3 311 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 TRUB1Q8WWH5 349 aaKnown RBP3.55□□□□□ -1.84
LINC00649-220ENST00000628906 RSG1Q9BU20 258 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 FGF20Q9NP95 211 aaPredicted RBP3.55□□□□□ -1.84
LINC00649-220ENST00000628906 FGFR1OP2Q9NVK5 253 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 MRPL16Q9NX20 251 aaKnown RBP3.55□□□□□ -1.84
LINC00649-220ENST00000628906 DAPK2Q9UIK4 370 aa3.55□□□□□ -1.84
LINC00649-220ENST00000628906 NXPH3O95157 252 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 F2RP25116 425 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 POLR2IP36954 125 aaKnown RBP3.54□□□□□ -1.84
LINC00649-220ENST00000628906 ARL6IP6Q8N6S5 226 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 ZNF738Q8NE65 137 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 LYPD6BQ8NI32 183 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 FCAMRQ8WWV6 532 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 LINC00479Q96M42 142 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 GTSF1LQ9H1H1 148 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 ARGLU1Q9NWB6 273 aaPredicted RBP3.54□□□□□ -1.84
LINC00649-220ENST00000628906 URGCP-MRPS24S4R325 110 aa3.54□□□□□ -1.84
LINC00649-220ENST00000628906 TRAV12-3A0A0B4J271 114 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 SEC11BP0C7V7 166 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 LIMS3P0CW19 117 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 LIMS4P0CW20 117 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 SLC25A4P12235 298 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
LINC00649-220ENST00000628906 LPAR6P43657 344 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 GALR1P47211 349 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 RND2P52198 227 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 BSXQ3C1V8 233 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 C4orf46Q504U0 113 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 HSD17B12Q53GQ0 312 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 MEDAGQ5VYS4 303 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 CNIH2Q6PI25 160 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 EIF4E3Q8N5X7 224 aaKnown RBP3.53□□□□□ -1.84
LINC00649-220ENST00000628906 STPG4Q8N801 248 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 OR51H1Q8NH63 302 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 ZNF431Q8TF32 576 aaPredicted RBP3.53□□□□□ -1.84
LINC00649-220ENST00000628906 SECTM1Q8WVN6 248 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 RAB3CQ96E17 227 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 PBDC1Q9BVG4 233 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 SLC25A32Q9H2D1 315 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 TMBIM4Q9HC24 238 aa3.53□□□□□ -1.84
LINC00649-220ENST00000628906 ERICH4A6NGS2 130 aa3.52□□□□□ -1.85
LINC00649-220ENST00000628906 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
LINC00649-220ENST00000628906 DTYMKP23919 212 aa3.52□□□□□ -1.85
LINC00649-220ENST00000628906 PSMA1P25786 263 aaKnown RBP3.52□□□□□ -1.85
LINC00649-220ENST00000628906 HRH1P35367 487 aa3.52□□□□□ -1.85
LINC00649-220ENST00000628906 RPS19P39019 145 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms