RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 AMTNQ6UX39 209 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 OR4X2Q8NGF9 303 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 COL25A1Q9BXS0 654 aaPredicted RBP12.2□□□□□ -0.46
PMS1-221ENST00000624204 FMC1Q96HJ9 113 aa12.19□□□□□ -0.46
PMS1-221ENST00000624204 ZNF414Q96IQ9 312 aa12.19□□□□□ -0.46
PMS1-221ENST00000624204 PPIFP30405 207 aaKnown RBP12.19□□□□□ -0.46
PMS1-221ENST00000624204 RAB9AP51151 201 aa12.19□□□□□ -0.46
PMS1-221ENST00000624204 INO80CQ6PI98 192 aaPredicted RBP12.19□□□□□ -0.46
PMS1-221ENST00000624204 LTAP01374 205 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 DLX1P56177 255 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 RIGQ13278 110 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 C17orf58Q2M2W7 97 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 BCL6BQ8N143 479 aaPredicted RBP12.18□□□□□ -0.46
PMS1-221ENST00000624204 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 OR5AN1Q8NGI8 311 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 KLF12Q9Y4X4 402 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 SPAARA0A1B0GVQ0 90 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 HAX1O00165 279 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 CT45A6P0DMU7 189 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 CT45A5P0DMU8 189 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 CT45A7P0DMV0 189 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 MYCNOSP40205 109 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 FXYD2P54710 66 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 SH2D6Q7Z4S9 175 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 NKX2-8O15522 239 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 FTH1P19P0C7X4 201 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 MEOX1P50221 254 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 TMEM105Q8N8V8 129 aa12.18□□□□□ -0.46
PMS1-221ENST00000624204 MRPS17Q9Y2R5 130 aaKnown RBP12.18□□□□□ -0.46
PMS1-221ENST00000624204 ABCA4P78363 2273 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 NDUFS8O00217 210 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 WFDC2Q14508 124 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 GCSAMQ8N6F7 178 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
PMS1-221ENST00000624204 ZNF492Q9P255 531 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 D6R8Y8 96 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 LYZP61626 148 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 CD300EQ496F6 205 aaPredicted RBP12.17□□□□□ -0.46
PMS1-221ENST00000624204 RPRMLQ8N4K4 120 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 STXBP6Q8NFX7 210 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 ABHD17AQ96GS6 310 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 CCL13Q99616 98 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 SRRM5B3KS81 715 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 J3QR89 54 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 CKS1BP61024 79 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 POU2AF1Q16633 256 aa12.17□□□□□ -0.46
PMS1-221ENST00000624204 IGKV1D-37A0A075B6S9 117 aa12.16□□□□□ -0.46
PMS1-221ENST00000624204 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.16□□□□□ -0.46
PMS1-221ENST00000624204 WT1-ASQ06250 92 aa12.16□□□□□ -0.46
PMS1-221ENST00000624204 SCGB2A2Q13296 93 aa12.16□□□□□ -0.46
PMS1-221ENST00000624204 ETDBQ3ZM63 59 aa12.16□□□□□ -0.46
PMS1-221ENST00000624204 ZCCHC24Q8N2G6 241 aaKnown RBP12.16□□□□□ -0.46
PMS1-221ENST00000624204 A0A096LNJ9 63 aa12.16□□□□□ -0.46
PMS1-221ENST00000624204 CEACAM3P40198 252 aa12.16□□□□□ -0.46
PMS1-221ENST00000624204 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.16□□□□□ -0.46
PMS1-221ENST00000624204 VGLL1Q99990 258 aa12.16□□□□□ -0.46
PMS1-221ENST00000624204 RUSC1-AS1Q66K80 236 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 Q86TA4 180 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 CECR9P0C854 216 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 LGALS9BQ3B8N2 356 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 LGALS9CQ6DKI2 356 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 NDUFA4L2Q9NRX3 87 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 CXCL12P48061 93 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 ATP5IP56385 69 aaPredicted RBP12.15□□□□□ -0.46
PMS1-221ENST00000624204 SLC25A48Q6ZT89 311 aaKnown RBP12.15□□□□□ -0.46
PMS1-221ENST00000624204 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
PMS1-221ENST00000624204 FSTL3O95633 263 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 ATP5G2Q06055 141 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 C6orf15Q6UXA7 325 aaPredicted RBP12.14□□□□□ -0.47
PMS1-221ENST00000624204 ARPC1AQ92747 370 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 IFI27L1Q96BM0 104 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
PMS1-221ENST00000624204 SVEP1Q4LDE5 3571 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 TGFAP01135 160 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
PMS1-221ENST00000624204 CCDC144NLQ6NUI1 221 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 FAM169BQ8N8A8 192 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 PRELID3AQ96N28 172 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 SRSF8Q9BRL6 282 aaKnown RBP12.14□□□□□ -0.47
PMS1-221ENST00000624204 SCGB1A1P11684 91 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 DIAPH2-AS1Q14236 149 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 DEFB104AQ8WTQ1 72 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 DPF1Q92782 380 aa12.14□□□□□ -0.47
PMS1-221ENST00000624204 IGHV3OR16-8A0A075B7F1 116 aa12.13□□□□□ -0.47
PMS1-221ENST00000624204 H3BMG7 143 aa12.13□□□□□ -0.47
PMS1-221ENST00000624204 K7EQM0 130 aa12.13□□□□□ -0.47
PMS1-221ENST00000624204 TMEM213A2RRL7 107 aa12.12□□□□□ -0.47
PMS1-221ENST00000624204 SLC25A17O43808 307 aa12.12□□□□□ -0.47
PMS1-221ENST00000624204 PRSS1P07477 247 aa12.12□□□□□ -0.47
PMS1-221ENST00000624204 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
PMS1-221ENST00000624204 RAB9BQ9NP90 201 aa12.12□□□□□ -0.47
PMS1-221ENST00000624204 SPRR3Q9UBC9 169 aa12.12□□□□□ -0.47
PMS1-221ENST00000624204 TRGV5A0A0B4J1U4 118 aa12.12□□□□□ -0.47
PMS1-221ENST00000624204 C22orf46C9J442 243 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms