RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM169BQ8N8A8 192 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
LITAF-221ENST00000622633 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
LITAF-221ENST00000622633 ENY2Q9NPA8 101 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 ZNF331Q9NQX6 463 aaPredicted RBP10.02□□□□□ -0.81
LITAF-221ENST00000622633 TMEM14BQ9NUH8 114 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 IDI2-AS1Q9NZ38 188 aa10.02□□□□□ -0.81
LITAF-221ENST00000622633 CEACAM4O75871 244 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 ACTL6BO94805 426 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 TEX29Q8N6K0 151 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 MAP1LC3CQ9BXW4 147 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 A0A1W2PRE2 83 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 IZUMO1RA6ND01 250 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 APOMO95445 188 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
LITAF-221ENST00000622633 OSTCQ9NRP0 149 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 FOXA2Q9Y261 457 aaPredicted RBP10.01□□□□□ -0.81
LITAF-221ENST00000622633 BOD1L1Q8NFC6 3051 aa10.01□□□□□ -0.81
LITAF-221ENST00000622633 CENPVL3A0A0U1RRI6 287 aa10□□□□□ -0.81
LITAF-221ENST00000622633 IGHG4P01861 327 aa10□□□□□ -0.81
LITAF-221ENST00000622633 THBDP07204 575 aa10□□□□□ -0.81
LITAF-221ENST00000622633 GLRXP35754 106 aa10□□□□□ -0.81
LITAF-221ENST00000622633 GAGE13Q4V321 117 aa10□□□□□ -0.81
LITAF-221ENST00000622633 MIR17HGQ75NE6 70 aa10□□□□□ -0.81
LITAF-221ENST00000622633 MOB3BQ86TA1 216 aa10□□□□□ -0.81
LITAF-221ENST00000622633 TMEM116Q8NCL8 245 aa10□□□□□ -0.81
LITAF-221ENST00000622633 OR4X2Q8NGF9 303 aa10□□□□□ -0.81
LITAF-221ENST00000622633 OR9G4Q8NGQ1 327 aa10□□□□□ -0.81
LITAF-221ENST00000622633 PRELID3AQ96N28 172 aa10□□□□□ -0.81
LITAF-221ENST00000622633 CCL13Q99616 98 aa10□□□□□ -0.81
LITAF-221ENST00000622633 ZNRD1Q9P1U0 126 aa10□□□□□ -0.81
LITAF-221ENST00000622633 EP300Q09472 2414 aaPredicted RBP10□□□□□ -0.81
LITAF-221ENST00000622633 MBD3L4A6NDZ8 208 aaPredicted RBP10□□□□□ -0.81
LITAF-221ENST00000622633 MBD3L3A6NE82 208 aaPredicted RBP10□□□□□ -0.81
LITAF-221ENST00000622633 MBD3L5A6NJ08 208 aaPredicted RBP10□□□□□ -0.81
LITAF-221ENST00000622633 E9PLD3 99 aa10□□□□□ -0.81
LITAF-221ENST00000622633 OR2J3O76001 311 aa10□□□□□ -0.81
LITAF-221ENST00000622633 ZADH2Q8N4Q0 377 aa10□□□□□ -0.81
LITAF-221ENST00000622633 MBD3L2Q8NHZ7 208 aaPredicted RBP10□□□□□ -0.81
LITAF-221ENST00000622633 K7ERJ3 54 aa9.99□□□□□ -0.81
LITAF-221ENST00000622633 SRSF1Q07955 248 aaKnown RBP eCLIP9.99□□□□□ -0.81
LITAF-221ENST00000622633 TM4SF20Q53R12 229 aa9.99□□□□□ -0.81
LITAF-221ENST00000622633 PIP4P1Q86T03 277 aa9.99□□□□□ -0.81
LITAF-221ENST00000622633 SNRNP40Q96DI7 357 aaKnown RBP9.99□□□□□ -0.81
LITAF-221ENST00000622633 DSCAMO60469 2012 aa9.99□□□□□ -0.81
LITAF-221ENST00000622633 SMAD7O15105 426 aaKnown RBP9.99□□□□□ -0.81
LITAF-221ENST00000622633 PPIFP30405 207 aaKnown RBP9.99□□□□□ -0.81
LITAF-221ENST00000622633 FXYD2P54710 66 aa9.99□□□□□ -0.81
LITAF-221ENST00000622633 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
LITAF-221ENST00000622633 C11orf52Q96A22 123 aa9.99□□□□□ -0.81
LITAF-221ENST00000622633 RNF7Q9UBF6 113 aa9.99□□□□□ -0.81
LITAF-221ENST00000622633 A0A1B0GWB2 263 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 SRRM4A7MD48 611 aaKnown RBP9.98□□□□□ -0.81
LITAF-221ENST00000622633 PRR20EP86478 221 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 PRR20CP86479 221 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 PRR20DP86480 221 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 PRR20BP86481 221 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 PRR20AP86496 221 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 TNFAIP6P98066 277 aaPredicted RBP9.98□□□□□ -0.81
LITAF-221ENST00000622633 PSG5Q15238 335 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 MLANAQ16655 118 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 AMTNQ6UX39 209 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 FAM216BQ8N7L0 139 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 CACNA1HO95180 2353 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 IGKV1-16P04430 117 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 CT45A6P0DMU7 189 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 CT45A5P0DMU8 189 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 CT45A7P0DMV0 189 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 SRD5A1P18405 259 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 TAS2R45P59539 299 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 RASL11AQ6T310 242 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 C22orf34Q6ZV56 151 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 CHCHD1Q96BP2 118 aaKnown RBP9.98□□□□□ -0.81
LITAF-221ENST00000622633 GAFA1Q96PS6 74 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 PLEKHA3Q9HB20 300 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
LITAF-221ENST00000622633 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 RHODO00212 210 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 IGHV1-46P01743 117 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 FAM162BQ5T6X4 162 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 ADTRPQ96IZ2 230 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 NABP2Q9BQ15 211 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 RAB9BQ9NP90 201 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 TNCP24821 2201 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 UPK2O00526 184 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 CENPWQ5EE01 88 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 C8orf46Q8TAG6 207 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
LITAF-221ENST00000622633 RP1L1Q8IWN7 2480 aaPredicted RBP9.97□□□□□ -0.81
LITAF-221ENST00000622633 IGKV1OR2-108A0A075B7D4 117 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 TEX50A0A1B0GTY4 177 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 OR5AL1P0C617 328 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 GATA4P43694 442 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 FAM27E3Q08E93 113 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 RTL8BQ17RB0 113 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 PQLC2Q6ZP29 291 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms