RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 HMGB3O15347 200 aaKnown RBP2□□□□□ -2.09
CPNE3-213ENST00000622183 MRPS14O60783 128 aaKnown RBP2□□□□□ -2.09
CPNE3-213ENST00000622183 TTRP02766 147 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 SCTP09683 121 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 IL7P13232 177 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 FGF7P21781 194 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 PSMB8P28062 276 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 S100A7P31151 101 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 CSN1S1P47710 185 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 EMP1P54849 157 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 TPI1P60174 286 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 GNGT1P63211 74 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 ERHP84090 104 aaKnown RBP2□□□□□ -2.09
CPNE3-213ENST00000622183 ZNF791Q3KP31 576 aaPredicted RBP2□□□□□ -2.09
CPNE3-213ENST00000622183 COL5A1-AS1Q5SY13 56 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 NCMAPQ5T1S8 102 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 OR5A2Q8NGI9 324 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 DCANP1Q8TF63 244 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 THEM6Q8WUY1 208 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 KLK6Q92876 244 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 BORCS7Q96B45 105 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 CCDC115Q96NT0 180 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 GPER1Q99527 375 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 TAF9BQ9HBM6 251 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 UQCC1Q9NVA1 299 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 PRNDQ9UKY0 176 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 U3KQ87 197 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 ABCA8O94911 1581 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 DOCK5Q9H7D0 1870 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 SYCP2Q9BX26 1530 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 SBF2Q86WG5 1849 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 A2ML1A8K2U0 1454 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 IQSEC2Q5JU85 1478 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 BAHCC1Q9P281 2608 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 COL4A2P08572 1712 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 HFM1A2PYH4 1435 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 ANKRD50Q9ULJ7 1429 aa2□□□□□ -2.09
CPNE3-213ENST00000622183 PIK3C2BO00750 1634 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 HECW1Q76N89 1606 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 PTPN23Q9H3S7 1636 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 NUP210Q8TEM1 1887 aaPredicted RBP1.99□□□□□ -2.09
CPNE3-213ENST00000622183 KDM5CP41229 1560 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 TIAM1Q13009 1591 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 NRKQ7Z2Y5 1582 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 VWDEQ8N2E2 1590 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 J3QQQ9 107 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 LEPROTO15243 131 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 CREBL2O60519 120 aaPredicted RBP1.99□□□□□ -2.09
CPNE3-213ENST00000622183 HLA-EP13747 358 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 RPS3P23396 243 aaKnown RBP eCLIP1.99□□□□□ -2.09
CPNE3-213ENST00000622183 GNG4P50150 75 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 NCS1P62166 190 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ZNF846Q147U1 533 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 PCOTHQ58A44 107 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 FOXI2Q6ZQN5 318 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 OOSP2Q86WS3 158 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 C20orf196Q8IYI0 205 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 PLPP5Q8NEB5 264 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 OR11H6Q8NGC7 330 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 LINC00052Q96N35 136 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 CHST6Q9GZX3 395 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 EFCAB1Q9HAE3 211 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ACER3Q9NUN7 267 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 C14orf105Q9NVL8 296 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 TIMM9Q9Y5J7 89 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 TOPBP1Q92547 1522 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 LRRC7Q96NW7 1537 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ARAP2Q8WZ64 1704 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 PXDNLA1KZ92 1463 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ATP7BP35670 1465 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ERVK-7P63135 1459 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ITSN2Q9NZM3 1697 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ADAMTS7Q9UKP4 1686 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 ANK1P16157 1881 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 RIMBP3CA6NJZ7 1639 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 RIMBP3BA6NNM3 1639 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 RNF17Q9BXT8 1623 aaKnown RBP1.99□□□□□ -2.09
CPNE3-213ENST00000622183 RIMBP3Q9UFD9 1639 aa1.99□□□□□ -2.09
CPNE3-213ENST00000622183 STRCQ7RTU9 1775 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 CUX1P39880 1505 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 TRAV7A0A075B6U4 112 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 FAM236DA0A1B0GTK5 79 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 FABP5P3A8MUU1 101 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 C1orf196B1AJZ1 125 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 CLDN25C9JDP6 229 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 H3BT86 120 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 AIPO00170 330 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 CDC42EP2O14613 210 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 OVOL1O14753 267 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 LGALS1P09382 135 aaKnown RBP1.98□□□□□ -2.09
CPNE3-213ENST00000622183 ZNF705DP0CH99 300 aaPredicted RBP1.98□□□□□ -2.09
CPNE3-213ENST00000622183 FAM236CP0DP71 79 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 G6PCP35575 357 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 RPL28P46779 137 aaKnown RBP1.98□□□□□ -2.09
CPNE3-213ENST00000622183 POLR2HP52434 150 aaKnown RBP1.98□□□□□ -2.09
CPNE3-213ENST00000622183 NDUFA6P56556 154 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 LCN6P62502 163 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 BTG2P78543 158 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms