RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 OR4C46A6NHA9 309 aa10.65□□□□□ -0.7
SIRPA-204ENST00000622179 IGKV3-20P01619 116 aa10.65□□□□□ -0.7
SIRPA-204ENST00000622179 RPS20P60866 119 aaKnown RBP10.65□□□□□ -0.7
SIRPA-204ENST00000622179 BRD3OSQ6XYD6 125 aa10.65□□□□□ -0.7
SIRPA-204ENST00000622179 TRAV40A0A0B4J280 105 aa10.65□□□□□ -0.71
SIRPA-204ENST00000622179 SNAI2O43623 268 aa10.65□□□□□ -0.71
SIRPA-204ENST00000622179 PRTN3P24158 256 aa10.65□□□□□ -0.71
SIRPA-204ENST00000622179 EFNA4P52798 201 aa10.65□□□□□ -0.71
SIRPA-204ENST00000622179 HIST1H1AQ02539 215 aaPredicted RBP10.65□□□□□ -0.71
SIRPA-204ENST00000622179 CDPF1Q6NVV7 123 aa10.65□□□□□ -0.71
SIRPA-204ENST00000622179 RNF5Q99942 180 aa10.65□□□□□ -0.71
SIRPA-204ENST00000622179 BPESC1Q9GZL8 116 aa10.65□□□□□ -0.71
SIRPA-204ENST00000622179 GPX1P07203 203 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 NIT1Q86X76 327 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 ZFP30Q9Y2G7 519 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 DYSFO75923 2080 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 ATG2AQ2TAZ0 1938 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 LBHQ53QV2 105 aaPredicted RBP10.64□□□□□ -0.71
SIRPA-204ENST00000622179 LINC00311Q8N616 119 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 MYOZ3Q8TDC0 251 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 RITA1Q96K30 269 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 MAP1LC3AQ9H492 121 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 KMT2EQ8IZD2 1858 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 NOTCH2Q04721 2471 aa10.64□□□□□ -0.71
SIRPA-204ENST00000622179 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 LCN12Q6JVE5 192 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 SOX21Q9Y651 276 aaPredicted RBP10.63□□□□□ -0.71
SIRPA-204ENST00000622179 TCF21O43680 179 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 COX6B1P14854 86 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 SLC25A34Q6PIV7 304 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 FER1L6-AS1Q8NA97 138 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 PRDM13Q9H4Q3 707 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 PHLDA3Q9Y5J5 127 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 K7EN84 100 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 NDUFS7O75251 213 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 UQCRFS1P47985 274 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 Q8TAT8 98 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 NCKAP5O14513 1909 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 TRBV20OR9-2A0A075B6H5 130 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 TMEM208Q9BTX3 173 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 V9GYV3 84 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 EXPH5Q8NEV8 1989 aa10.63□□□□□ -0.71
SIRPA-204ENST00000622179 SPTBN4Q9H254 2564 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 M0R1W7 72 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 MIEN1Q9BRT3 115 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 KAAG1Q9UBP8 84 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 C22orf46C9J442 243 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 M0R381 172 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 LINC00614P0C842 121 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 P0C879 139 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 ID1P41134 155 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 ZNF138P52744 262 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 E7EUB6 86 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 TYMSP04818 313 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 MORN5Q5VZ52 161 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 C1orf229Q6ZS94 237 aaPredicted RBP10.62□□□□□ -0.71
SIRPA-204ENST00000622179 VPS25Q9BRG1 176 aa10.62□□□□□ -0.71
SIRPA-204ENST00000622179 TNRC6AQ8NDV7 1962 aaKnown RBP10.61□□□□□ -0.71
SIRPA-204ENST00000622179 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
SIRPA-204ENST00000622179 IGKV1OR2-108A0A075B7D4 117 aa10.61□□□□□ -0.71
SIRPA-204ENST00000622179 CHD8Q9HCK8 2581 aa10.61□□□□□ -0.71
SIRPA-204ENST00000622179 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
SIRPA-204ENST00000622179 SAA4P35542 130 aa10.61□□□□□ -0.71
SIRPA-204ENST00000622179 KLF2Q9Y5W3 355 aaPredicted RBP10.61□□□□□ -0.71
SIRPA-204ENST00000622179 COL5A1P20908 1838 aaPredicted RBP10.61□□□□□ -0.71
SIRPA-204ENST00000622179 TGFAP01135 160 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 ORMDL3Q8N138 153 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 IGLC7A0M8Q6 106 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 Q8NA96 180 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 C11orf52Q96A22 123 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 NDUFS6O75380 124 aaKnown RBP10.6□□□□□ -0.71
SIRPA-204ENST00000622179 MINOS1Q5TGZ0 78 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 ZNF562Q6V9R5 426 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 MINOS1-NBL1R4GNA1 71 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 NDPQ00604 133 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 ATP5L2Q7Z4Y8 100 aa10.6□□□□□ -0.71
SIRPA-204ENST00000622179 TOMM40O96008 361 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 IGHV2-70P01814 119 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 C3orf79P0CE67 100 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 Q6AWC8 147 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 HCFC1P51610 2035 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 NDUFB8O95169 186 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 NUDT3O95989 172 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 TDGF1P3P51864 188 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 C1orf194Q5T5A4 169 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 FXYD5Q96DB9 178 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 SHANK2-AS3Q9BTD1 123 aa10.59□□□□□ -0.71
SIRPA-204ENST00000622179 COL25A1Q9BXS0 654 aaPredicted RBP10.59□□□□□ -0.71
SIRPA-204ENST00000622179 CR1LQ2VPA4 569 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 TMEM249Q2WGJ8 235 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 CYB5R2Q6BCY4 276 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 C7orf71A4D174 169 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 SRD5A1P18405 259 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 EBLN2Q6P2I7 272 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 CGB3P0DN86 165 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 CGB7P0DN87 165 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms