RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HLA-DRB4P13762 266 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 TGFBR1P36897 503 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 ARPP19P56211 112 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 TSPEAR-AS2P59090 65 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 HES1Q14469 280 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 TMEM155Q4W5P6 130 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 IZUMO2Q6UXV1 221 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 FOXI2Q6ZQN5 318 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 AAED1Q7RTV5 226 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 SPATA12Q7Z6I5 190 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 TEN1Q86WV5 123 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 Q8N976 141 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 MORN4Q8NDC4 146 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 OR10P1Q8NGE3 313 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 WFDC5Q8TCV5 224 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 DPH3Q96FX2 82 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 CIB3Q96Q77 187 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-229ENST00000621897 UPK3BQ9BT76 320 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 Q9H521 79 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 C11orf1Q9H5F2 150 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 C16orf95Q9H693 158 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 SNX12Q9UMY4 172 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 LINC00588Q9Y4M8 146 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 HLA-DRB4X5D2U9 266 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 RRBP1Q9P2E9 1410 aaKnown RBP2.22□□□□□ -2.05
BRCA1-229ENST00000621897 MED1Q15648 1581 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-229ENST00000621897 NUP205Q92621 2012 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 TOPBP1Q92547 1522 aa2.22□□□□□ -2.05
BRCA1-229ENST00000621897 POLEQ07864 2286 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 CEP164Q9UPV0 1460 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 TRGV10A0A0A0MS01 117 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 IGHV1-3A0A0C4DH29 117 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 PNMA8CA0A1B0GUJ8 204 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 RGS12O14924 1447 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 UQCRQO14949 82 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 LEPROTO15243 131 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 MPC2O95563 127 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 IGLV3-19P01714 112 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 TCRAP04437 139 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 CCL3P10147 92 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 S100A10P60903 97 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 TMEM91Q6ZNR0 172 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 ATOH7Q8N100 152 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 C10orf111Q8N326 155 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 TTC9CQ8N5M4 171 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 LINC00311Q8N616 119 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 PACRGLQ8N7B6 248 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 OR5D16Q8NGK9 328 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 LCN9Q8WX39 176 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 MCEEQ96PE7 176 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 YEATS2Q9ULM3 1422 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 HSPE1-MOB4S4R3N1 261 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 NUP98P52948 1817 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 NISCHQ9Y2I1 1504 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 ALPK3Q96L96 1907 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 MYH13Q9UKX3 1938 aa2.21□□□□□ -2.06
BRCA1-229ENST00000621897 ADGRB1O14514 1584 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 DNMBPQ6XZF7 1577 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 BAZ1AQ9NRL2 1556 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-229ENST00000621897 TRAV12-2A0A075B6T6 113 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 OR51F1A6NGY5 319 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 IGHV1-46P01743 117 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 IGKV1-16P04430 117 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 SLC25A5P05141 298 aaKnown RBP2.2□□□□□ -2.06
BRCA1-229ENST00000621897 CD14P08571 375 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 PYYP10082 97 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 FXYD7P58549 80 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 AKR1C1Q04828 323 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 CATR1Q13166 79 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 C10orf91Q5T1B1 145 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 C16orf47Q6ZP98 133 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-229ENST00000621897 Q6ZR03 302 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 C7orf65Q6ZTY9 151 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 MIR17HGQ75NE6 70 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 ZNF101Q8IZC7 436 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 HIST3H2BBQ8N257 126 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 ZFP62Q8NB50 900 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-229ENST00000621897 CIRBP-AS1Q8TBR5 109 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 COPS9Q8WXC6 57 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 PRELID3AQ96N28 172 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 HIST1H2BLQ99880 126 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 NPCDR1Q9BY65 106 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 NAA60Q9H7X0 242 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 OSTCQ9NRP0 149 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 ZNRD1Q9P1U0 126 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 ANKRD12Q6UB98 2062 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 ANAPC1Q9H1A4 1944 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 KTN1Q86UP2 1357 aaKnown RBP2.2□□□□□ -2.06
BRCA1-229ENST00000621897 CCDC88AQ3V6T2 1871 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 ADGRL1O94910 1474 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 CFTRP13569 1480 aa2.2□□□□□ -2.06
BRCA1-229ENST00000621897 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 KIF13AQ9H1H9 1805 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 PTPRTO14522 1441 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 DLC1Q96QB1 1528 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 TMEM223A0PJW6 202 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 COLCA2A8K830 154 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 C17orf51A8MQB3 221 aa2.19□□□□□ -2.06
BRCA1-229ENST00000621897 A8MWP4 228 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms