RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 FAM231DQ6ZW35 169 aa7.9□□□□□ -1.14
TNFAIP3-210ENST00000620204 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.14
TNFAIP3-210ENST00000620204 IFI27L1Q96BM0 104 aa7.9□□□□□ -1.14
TNFAIP3-210ENST00000620204 PRELID3AQ96N28 172 aa7.9□□□□□ -1.14
TNFAIP3-210ENST00000620204 TMEM160Q9NX00 188 aa7.9□□□□□ -1.14
TNFAIP3-210ENST00000620204 IGF2RP11717 2491 aa7.9□□□□□ -1.14
TNFAIP3-210ENST00000620204 C9orf172C9J069 976 aa7.9□□□□□ -1.15
TNFAIP3-210ENST00000620204 LTAP01374 205 aa7.9□□□□□ -1.15
TNFAIP3-210ENST00000620204 INSL3P51460 131 aa7.9□□□□□ -1.15
TNFAIP3-210ENST00000620204 CCL11P51671 97 aa7.9□□□□□ -1.15
TNFAIP3-210ENST00000620204 MRPL32Q9BYC8 188 aaKnown RBP7.9□□□□□ -1.15
TNFAIP3-210ENST00000620204 CXXC4Q9H2H0 198 aa7.9□□□□□ -1.15
TNFAIP3-210ENST00000620204 SPINK8P0C7L1 97 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 CT45A10P0DMU9 189 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 CKS2P33552 79 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 OR9G4Q8NGQ1 327 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 FAM167A-AS1Q96KT0 104 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 SPAG8Q99932 426 aaPredicted RBP7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 Q9H3A6 140 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 SMIM17P0DL12 118 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 HIST1H4GQ99525 98 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 H3BVH4 76 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 DLL1O00548 723 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 SRSF6Q13247 344 aaKnown RBP7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 GAGE13Q4V321 117 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 C1orf229Q6ZS94 237 aaPredicted RBP7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 MOGAT3Q86VF5 341 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 AMN1Q8IY45 258 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 JPT1Q9UK76 154 aa7.89□□□□□ -1.15
TNFAIP3-210ENST00000620204 DMXL1Q9Y485 3027 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 TRGV8A0A0C4DH27 118 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 SAA1P0DJI8 122 aaPredicted RBP7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 EIF4EBP1Q13541 118 aaPredicted RBP7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 RNFT1Q5M7Z0 435 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 C20orf78Q9BR46 151 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 INSIG2Q9Y5U4 225 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 SRRM4A7MD48 611 aaKnown RBP7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 APOMO95445 188 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 KIR2DS2P43631 304 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 NRN1LQ496H8 165 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 NDFIP1Q9BT67 221 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 COL6A6A6NMZ7 2263 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 TMEM213A2RRL7 107 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 RBP4P02753 201 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 Q71RC1 249 aaPredicted RBP7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 SYT8Q8NBV8 401 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 ZNF48Q96MX3 618 aaPredicted RBP7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 LINC00470Q9BZP3 86 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 TMEM14BQ9NUH8 114 aa7.88□□□□□ -1.15
TNFAIP3-210ENST00000620204 SUB1P53999 127 aaKnown RBP eCLIP7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 PRCDQ00LT1 54 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 OR1L8Q8NGR8 309 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 CHAC1Q9BUX1 264 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 FOXA2Q9Y261 457 aaPredicted RBP7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 NCOR2Q9Y618 2525 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 ABCA4P78363 2273 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 RNASE2P10153 161 aaKnown RBP7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 PATE2Q6UY27 113 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 BOD1L2Q8IYS8 172 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 OR5AN1Q8NGI8 311 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 FAM222BQ8WU58 562 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 FXYD5Q96DB9 178 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 C15orf65H3BRN8 121 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 UPK2O00526 184 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 TCRAP04437 139 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 APOBEC3AP31941 199 aaPredicted RBP7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 KIR2DL2P43627 348 aaPredicted RBP7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 TWIST1Q15672 202 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 MBNL2Q5VZF2 373 aaKnown RBP7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 FOXC2Q99958 501 aa7.87□□□□□ -1.15
TNFAIP3-210ENST00000620204 CHD8Q9HCK8 2581 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 FNDC10F2Z333 226 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 CNIH1O95406 144 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 Q0VFX4 171 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 ITLN1Q8WWA0 313 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 MRAP2Q96G30 205 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 SIGLEC8Q9NYZ4 499 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 HBDP02042 147 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 RPRMLQ8N4K4 120 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 NPIPB6E9PJ23 425 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 EVI2AP22794 236 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 ZC2HC1BQ5TFG8 222 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 TTTY12Q9BZ98 90 aa7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 SOX21Q9Y651 276 aaPredicted RBP7.86□□□□□ -1.15
TNFAIP3-210ENST00000620204 SPTAN1Q13813 2472 aaKnown RBP7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 A0A1W2PNU3 283 aaPredicted RBP7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 FAM90A9PA6NNJ1 464 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 ZNF766Q5HY98 468 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 PLA2G2CQ5R387 149 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 DUX4L9Q6RFH8 374 aaPredicted RBP7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 CCL13Q99616 98 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 PLSCR4Q9NRQ2 329 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 TMEM238LA0A1B0GVL6 79 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 ARL3P36405 182 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 ORMDL3Q8N138 153 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 ANAPC13Q9BS18 74 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 KLK15Q9H2R5 256 aa7.85□□□□□ -1.15
TNFAIP3-210ENST00000620204 MRPL36Q9P0J6 103 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms