RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IGKV1-5P01602 117 aa7.81□□□□□ -1.16
TNFRSF9-204ENST00000615230 GNG5P63218 68 aa7.81□□□□□ -1.16
TNFRSF9-204ENST00000615230 ERCC8Q13216 396 aa7.81□□□□□ -1.16
TNFRSF9-204ENST00000615230 RASL10AQ92737 203 aa7.81□□□□□ -1.16
TNFRSF9-204ENST00000615230 HIST1H4GQ99525 98 aa7.81□□□□□ -1.16
TNFRSF9-204ENST00000615230 IGKV1D-8A0A087WSZ0 117 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 TRAV12-3A0A0B4J271 114 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 A0A1W2PNU3 283 aaPredicted RBP7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 PYYP10082 97 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 ATP5G3P48201 142 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 WDR86Q86TI4 376 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 CENPVL3A0A0U1RRI6 287 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 IGHV4-59P01825 116 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 GRNP28799 593 aaKnown RBP7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 POU2AF1Q16633 256 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 OBSL1O75147 1896 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 GFRA4Q9GZZ7 299 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 LOC102724200A0A096LPH7 203 aaPredicted RBP7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 C5orf63A6NC05 138 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 CIDEAO60543 219 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 APOHP02749 345 aaPredicted RBP7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 UBE2E2Q96LR5 201 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 PTPRZ1P23471 2315 aaPredicted RBP7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 TMEM131Q92545 1883 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 C15orf62A8K5M9 175 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 F5H768 121 aa7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 SRP19P09132 144 aaKnown RBP7.8□□□□□ -1.16
TNFRSF9-204ENST00000615230 IGKV2-40A0A087WW87 121 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF9-204ENST00000615230 A8MXK9 166 aa7.79□□□□□ -1.16
TNFRSF9-204ENST00000615230 IGKV2D-40P01614 121 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF9-204ENST00000615230 NMBP08949 121 aa7.79□□□□□ -1.16
TNFRSF9-204ENST00000615230 NDPQ00604 133 aa7.79□□□□□ -1.16
TNFRSF9-204ENST00000615230 CHCHD1Q96BP2 118 aaKnown RBP7.79□□□□□ -1.16
TNFRSF9-204ENST00000615230 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
TNFRSF9-204ENST00000615230 TRAV3A0A0B4J244 114 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 ZNF503-AS2A6NEH8 195 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 HIGD1CA8MV81 97 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 H3BRN7 92 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 H3BVH4 76 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 ZNF114Q8NC26 417 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 Q8NFD4 153 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 IGFBPL1Q8WX77 278 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 SLC25A2Q9BXI2 301 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 C22orf46C9J442 243 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 RNF182Q8N6D2 247 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 ISOC2Q96AB3 205 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 MYLKQ15746 1914 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 SH2D1AO60880 128 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 GP9P14770 177 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 CDKN1BP46527 198 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 LAGE3Q14657 143 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 THAP8Q8NA92 274 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 TRBV25-1A0A075B6N4 114 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 Q6ZSR3 168 aa7.78□□□□□ -1.16
TNFRSF9-204ENST00000615230 AZU1P20160 251 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 RNF126Q9BV68 326 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 SMIM6P0DI80 62 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 TEX43Q6ZNM6 134 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 ZNRD1Q9P1U0 126 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 UBE2CO00762 179 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 TNFRSF13BO14836 293 aaPredicted RBP7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 HBDP02042 147 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 VOPP1Q96AW1 172 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 PLEKHB2Q96CS7 222 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 C16orf74Q96GX8 76 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 C12orf57Q99622 126 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 HSPB9Q9BQS6 159 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 ZNF492Q9P255 531 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 IGKV1-16P04430 117 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 GNB1LQ9BYB4 327 aa7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 CARHSP1Q9Y2V2 147 aaKnown RBP7.77□□□□□ -1.17
TNFRSF9-204ENST00000615230 RBAKDNA6NC62 111 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 SDHCQ99643 169 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 PFN1P07737 140 aaKnown RBP7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 HOXD3P31249 432 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 IFITM3Q01628 133 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 SLC25A34Q6PIV7 304 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 MBD6Q96DN6 1003 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 RNF222A6NCQ9 220 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 SRSF4Q08170 494 aaKnown RBP7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 TMEM160Q9NX00 188 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 CTSZQ9UBR2 303 aa7.76□□□□□ -1.17
TNFRSF9-204ENST00000615230 G3V318 75 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 CHTOPQ9Y3Y2 248 aaKnown RBP7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 LYL1P12980 280 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 OVOL2Q9BRP0 275 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 K7EMT4 169 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 DEFB130BP0DP73 79 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 DEFB130AP0DP74 79 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 FXYD7P58549 80 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 SEM1Q6ZVN7 128 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 IGHV4-31P0DP07 118 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 IGHV4-38-2P0DP08 117 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 EVI2AP22794 236 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 BTCP35070 178 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms