RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 A0A1B0GUS0 222 aa10.56□□□□□ -0.72
TCF3-220ENST00000611869 SOX21Q9Y651 276 aaPredicted RBP10.56□□□□□ -0.72
TCF3-220ENST00000611869 NPFFO15130 113 aa10.56□□□□□ -0.72
TCF3-220ENST00000611869 TMEM97Q5BJF2 176 aa10.56□□□□□ -0.72
TCF3-220ENST00000611869 C18orf15Q96N68 181 aa10.56□□□□□ -0.72
TCF3-220ENST00000611869 Q8NA96 180 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 GLMPQ8WWB7 406 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 TRAV41A0A0B4J266 112 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 H3BUX3 64 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 ZNF329Q86UD4 541 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 LY96Q9Y6Y9 160 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 A0A1B0GV90 55 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 ZNF324O75467 553 aaPredicted RBP10.55□□□□□ -0.72
TCF3-220ENST00000611869 CTAG1AP78358 180 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PRUNE2Q8WUY3 3088 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 FABP5P3A8MUU1 101 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PROP1O75360 226 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PLA2G5P39877 138 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 TDGF1P3P51864 188 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PRR20EP86478 221 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PRR20CP86479 221 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PRR20DP86480 221 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PRR20BP86481 221 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 PRR20AP86496 221 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 UTF1Q5T230 341 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 ASPHD1Q5U4P2 390 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 ZNF562Q6V9R5 426 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 Q8TAT8 98 aa10.55□□□□□ -0.72
TCF3-220ENST00000611869 HAX1O00165 279 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 SSBP2P81877 361 aaPredicted RBP10.54□□□□□ -0.72
TCF3-220ENST00000611869 COL5A1-AS1Q5SY13 56 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 NUP35Q8NFH5 326 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 ST6GALNAC6Q969X2 333 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 MOB4Q9Y3A3 225 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 FAM74A4Q5TZK3 123 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 PMCHL2Q9BQD1 86 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 C11orf1Q9H5F2 150 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 DDB2Q92466 427 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 DYSFO75923 2080 aa10.54□□□□□ -0.72
TCF3-220ENST00000611869 NDPQ00604 133 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 PAX8Q06710 450 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 SRD5A1P18405 259 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 Q6AWC8 147 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 FOSL1P15407 271 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 VWC2Q2TAL6 325 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 SLC50A1Q9BRV3 221 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 NUDT3O95989 172 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 UQCRFS1P47985 274 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 FAM159AQ6UWV7 190 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 SCGB1D4Q6XE38 83 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 ORMDL3Q8N138 153 aa10.53□□□□□ -0.72
TCF3-220ENST00000611869 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
TCF3-220ENST00000611869 NDUFB8O95169 186 aa10.52□□□□□ -0.72
TCF3-220ENST00000611869 DGAT2L7PQ6IED9 249 aa10.52□□□□□ -0.72
TCF3-220ENST00000611869 SLC25A34Q6PIV7 304 aa10.52□□□□□ -0.72
TCF3-220ENST00000611869 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
TCF3-220ENST00000611869 BRWD1-AS2P59051 145 aa10.52□□□□□ -0.73
TCF3-220ENST00000611869 SNRPD3P62318 126 aaKnown RBP10.52□□□□□ -0.73
TCF3-220ENST00000611869 NCKAP5O14513 1909 aa10.52□□□□□ -0.73
TCF3-220ENST00000611869 CHD3Q12873 2000 aaKnown RBP10.52□□□□□ -0.73
TCF3-220ENST00000611869 G3V318 75 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 FBLN7Q53RD9 439 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 PRDM13Q9H4Q3 707 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 ZMAT5Q9UDW3 170 aaKnown RBP10.51□□□□□ -0.73
TCF3-220ENST00000611869 SNAI2O43623 268 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 TOMM40O96008 361 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 IGHV2-70P01814 119 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 ODF3L1Q8IXM7 274 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 RITA1Q96K30 269 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 NIT1Q86X76 327 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 SHANK2-AS3Q9BTD1 123 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 TNRC6AQ8NDV7 1962 aaKnown RBP10.51□□□□□ -0.73
TCF3-220ENST00000611869 IGLC7A0M8Q6 106 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 ATP6V0E1O15342 81 aa10.51□□□□□ -0.73
TCF3-220ENST00000611869 IGHV2-5P01817 119 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 LINC00614P0C842 121 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 UBE2E1P51965 193 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 OR10J3Q5JRS4 329 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 WFDC12Q8WWY7 111 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 C7orf71A4D174 169 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 RNASE4P34096 147 aaKnown RBP10.5□□□□□ -0.73
TCF3-220ENST00000611869 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 ZNF502Q8TBZ5 544 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 DUX5Q96PT3 197 aa10.5□□□□□ -0.73
TCF3-220ENST00000611869 MYO9AB2RTY4 2548 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 DAZAP2Q15038 168 aaPredicted RBP10.49□□□□□ -0.73
TCF3-220ENST00000611869 ATP5L2Q7Z4Y8 100 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 VPS25Q9BRG1 176 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 NPFFR1Q9GZQ6 430 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 TRANK1O15050 2925 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 NAV2Q8IVL1 2488 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 A0A1B0GW15 77 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 A6NNC1 897 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 MAPK1IP1LQ8NDC0 245 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 ZNF414Q96IQ9 312 aa10.49□□□□□ -0.73
TCF3-220ENST00000611869 SRSF8Q9BRL6 282 aaKnown RBP10.49□□□□□ -0.73
TCF3-220ENST00000611869 NDUFAF3Q9BU61 184 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms