RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 CMTM2Q8TAZ6 248 aa12.48□□□□□ -0.41
CTSA-214ENST00000606788 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
CTSA-214ENST00000606788 BTF3L4Q96K17 158 aa12.48□□□□□ -0.41
CTSA-214ENST00000606788 RNF5Q99942 180 aa12.48□□□□□ -0.41
CTSA-214ENST00000606788 NPFFO15130 113 aa12.47□□□□□ -0.41
CTSA-214ENST00000606788 GATCO43716 136 aaKnown RBP12.47□□□□□ -0.41
CTSA-214ENST00000606788 EGR2P11161 476 aaPredicted RBP12.47□□□□□ -0.41
CTSA-214ENST00000606788 TYMSP04818 313 aa12.47□□□□□ -0.41
CTSA-214ENST00000606788 PDLIM4P50479 330 aa12.47□□□□□ -0.41
CTSA-214ENST00000606788 TGOLN2O43493 480 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 UBE2E1P51965 193 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 NOL4LQ96MY1 436 aaPredicted RBP12.46□□□□□ -0.41
CTSA-214ENST00000606788 CHD6Q8TD26 2715 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 TEX15Q9BXT5 2789 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 RPL19P84098 196 aaKnown RBP12.46□□□□□ -0.41
CTSA-214ENST00000606788 C15orf32Q32M92 178 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 LCNL1Q6ZST4 164 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 TPPP3Q9BW30 176 aa12.46□□□□□ -0.41
CTSA-214ENST00000606788 F8W735 103 aaPredicted RBP12.46□□□□□ -0.42
CTSA-214ENST00000606788 TCRAP04437 139 aa12.46□□□□□ -0.42
CTSA-214ENST00000606788 HLA-DMBP28068 263 aa12.46□□□□□ -0.42
CTSA-214ENST00000606788 MFAP4P55083 255 aa12.46□□□□□ -0.42
CTSA-214ENST00000606788 PVRIGQ6DKI7 326 aa12.46□□□□□ -0.42
CTSA-214ENST00000606788 BAGE3Q86Y29 109 aa12.46□□□□□ -0.42
CTSA-214ENST00000606788 OVOL3O00110 214 aa12.45□□□□□ -0.42
CTSA-214ENST00000606788 TRAV20A0A0B4J274 112 aa12.45□□□□□ -0.42
CTSA-214ENST00000606788 TMSB15BA0A087X1C1 80 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 MUC21A0A0G2JKD1 596 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 MUC21A0A140T8X8 626 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 CLEC3BP05452 202 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 CRISP2P16562 243 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 BRS3P32247 399 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 RHOGP84095 191 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 MUC21Q5SSG8 566 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 MINOS1Q5TGZ0 78 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 CLEC19AQ6UXS0 136 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 Q8N6K4 173 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
CTSA-214ENST00000606788 MINOS1-NBL1R4GNA1 71 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 HIGD1CA8MV81 97 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 HLA-DRB1P01911 266 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 MYCNOSP40205 109 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 C5orf17Q8NAS9 161 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 OR4F17Q8NGA8 305 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 NEU1Q99519 415 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 MXRA5Q9NR99 2828 aa12.44□□□□□ -0.42
CTSA-214ENST00000606788 SERF1AO75920 110 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 IQCJQ1A5X6 159 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 C1orf122Q6ZSJ8 110 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 BPIFA4PQ86YQ2 179 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 ARL2-SNX15V9GYD0 113 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 ACANP16112 2415 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 NBPF19A0A087WUL8 3843 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 CLEC2AQ6UVW9 174 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 OR2D3Q8NGH3 330 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 C7orf69Q9H7B7 122 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 TP53TG3Q9ULZ0 132 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 SORL1Q92673 2214 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
CTSA-214ENST00000606788 TAS2R60P59551 318 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 TMEM68Q96MH6 324 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 SHANK2-AS3Q9BTD1 123 aa12.43□□□□□ -0.42
CTSA-214ENST00000606788 NOTCH2Q04721 2471 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 SRIP30626 198 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 ZNF705FA8MVS1 300 aaPredicted RBP12.42□□□□□ -0.42
CTSA-214ENST00000606788 CTSGP08311 255 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 SLAQ13239 276 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 TMEM183BQ1AE95 376 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 OR5R1Q8NH85 324 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 GPR82Q96P67 336 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
CTSA-214ENST00000606788 TOMM40O96008 361 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 IGKV2-40A0A087WW87 121 aaPredicted RBP12.41□□□□□ -0.42
CTSA-214ENST00000606788 SCGB1D1O95968 90 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 IGKV2D-40P01614 121 aaPredicted RBP12.41□□□□□ -0.42
CTSA-214ENST00000606788 GDF5OSQ5U4N7 250 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 TTC9CQ8N5M4 171 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 Q8TAT8 98 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 RCHY1Q96PM5 261 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 ZNF331Q9NQX6 463 aaPredicted RBP12.41□□□□□ -0.42
CTSA-214ENST00000606788 C1RLQ9NZP8 487 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 TRBV19A0A075B6N1 114 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 H3BRN7 92 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 NDUFS6O75380 124 aaKnown RBP12.41□□□□□ -0.42
CTSA-214ENST00000606788 PMCHP20382 165 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 PRRC2AP48634 2157 aaKnown RBP12.41□□□□□ -0.42
CTSA-214ENST00000606788 TMEM136Q6ZRR5 245 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 Q6ZS46 218 aa12.41□□□□□ -0.42
CTSA-214ENST00000606788 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
CTSA-214ENST00000606788 NPIPB5A8MRT5 1133 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 AVPP01185 164 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 IGHV3-11P01762 117 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms