RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 FAM231BA6NCW3 169 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 FBLL1A6NHQ2 334 aaKnown RBP8.41□□□□□ -1.06
ZNF540-208ENST00000589857 IGLV2-8P01709 118 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 PSG1P11464 419 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 MORN5Q5VZ52 161 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 BAGE3Q86Y29 109 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 KRTAP1-3Q8IUG1 177 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 TTC9CQ8N5M4 171 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 ARL6IP6Q8N6S5 226 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 OR4B1Q8NGF8 309 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 TSKUQ8WUA8 353 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 BLNKQ8WV28 456 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 SHANK2-AS3Q9BTD1 123 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 SLC25A39Q9BZJ4 359 aaPredicted RBP8.41□□□□□ -1.06
ZNF540-208ENST00000589857 Q9H3A6 140 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 UBTD1Q9HAC8 227 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 MRPL36Q9P0J6 103 aaKnown RBP8.41□□□□□ -1.06
ZNF540-208ENST00000589857 MRPL27Q9P0M9 148 aaKnown RBP8.41□□□□□ -1.06
ZNF540-208ENST00000589857 HILPDAQ9Y5L2 63 aa8.41□□□□□ -1.06
ZNF540-208ENST00000589857 NSD1Q96L73 2696 aaPredicted RBP8.41□□□□□ -1.06
ZNF540-208ENST00000589857 IGHV2-70DA0A0C4DH43 119 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 A8MWL6 223 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 H3BRN7 92 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 GNG7O60262 68 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 TCRAP04437 139 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 TMEM11P17152 192 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 CBLN1P23435 193 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 UBE2E1P51965 193 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 RAB4BP61018 213 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 DEFA6Q01524 100 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 PDE6HQ13956 83 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 CYB5R2Q6BCY4 276 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF600Q6ZNG1 722 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 GFRA4Q9GZZ7 299 aa8.4□□□□□ -1.06
ZNF540-208ENST00000589857 RNASE7Q9H1E1 156 aaKnown RBP8.4□□□□□ -1.06
ZNF540-208ENST00000589857 CADP27708 2225 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 NCBP2LA6PVI3 153 aaKnown RBP8.39□□□□□ -1.07
ZNF540-208ENST00000589857 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 K7EIM0 57 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 TOX4O94842 621 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 LTAP01374 205 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 P01737 135 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 APCSP02743 223 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 FCGR2BP31994 310 aaPredicted RBP8.39□□□□□ -1.07
ZNF540-208ENST00000589857 RAB9AP51151 201 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 TMEM136Q6ZRR5 245 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 CIARTQ8N365 385 aaPredicted RBP8.39□□□□□ -1.07
ZNF540-208ENST00000589857 Q8N6K4 173 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 RNF125Q96EQ8 232 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 MS4A10Q96PG2 267 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 SIRPDQ9H106 197 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
ZNF540-208ENST00000589857 ZFP30Q9Y2G7 519 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 PRR14LQ5THK1 2151 aa8.39□□□□□ -1.07
ZNF540-208ENST00000589857 FN1P02751 2386 aaKnown RBP8.38□□□□□ -1.07
ZNF540-208ENST00000589857 IGLV11-55A0A075B6I3 123 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 WI2-2373I1.2A0A1W2PRP0 233 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 IGKV1-17P01599 117 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 HLA-DRB1P01911 266 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 GZMBP10144 247 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 PAX1P15863 534 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 CSN1S1P47710 185 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 PSG9Q00887 426 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 KLRD1Q13241 179 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 TMEM75Q8N9X5 138 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 NUDT10Q8NFP7 164 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 VN1R17PQ8TDU5 208 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 NUDT11Q96G61 164 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 SAMD10Q9BYL1 202 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 ZNF586Q9NXT0 402 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 C21orf62Q9NYP8 219 aa8.38□□□□□ -1.07
ZNF540-208ENST00000589857 TRBV19A0A075B6N1 114 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 IGHV3-21A0A0B4J1V1 117 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 A0A1B0GW15 77 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 APELAP0DMC3 54 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 RPL7P18124 248 aaKnown RBP8.37□□□□□ -1.07
ZNF540-208ENST00000589857 ATP5J2P56134 94 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 Q56UQ5 140 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 Q6AWC8 147 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 LHFPL4Q7Z7J7 247 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 SIGLECL1Q8N7X8 197 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 MLST8Q9BVC4 326 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 PRDM13Q9H4Q3 707 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 POLR3KQ9Y2Y1 108 aaPredicted RBP8.37□□□□□ -1.07
ZNF540-208ENST00000589857 VPS13CQ709C8 3753 aa8.37□□□□□ -1.07
ZNF540-208ENST00000589857 COL6A5A8TX70 2615 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 TRAV34A0A0B4J273 112 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 NDUFS8O00217 210 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 LY6HO94772 140 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 IL4P05112 153 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 RAB4AP20338 218 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 CDKN1AP38936 164 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 DLX1P56177 255 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 TCL1AP56279 114 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 GNG5P63218 68 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 KLK9Q2XQG4 91 aa8.36□□□□□ -1.07
ZNF540-208ENST00000589857 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms