RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 GNB4Q9HAV0 340 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 RABAC1Q9UI14 185 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 PRELID1Q9Y255 219 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 A0A087WWC5 75 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 A0A0G2JLM5 398 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 NBEAP1P0C6P0 100 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 HIST1H1EP10412 219 aaKnown RBP13.15□□□□□ -0.3
SREBF1-218ENST00000578469 GP9P14770 177 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 NPPCP23582 126 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 ADMP35318 185 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-218ENST00000578469 Q6ZS46 218 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 CBLN2Q8IUK8 224 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 SIGLECL1Q8N7X8 197 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 OR4F17Q8NGA8 305 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 TMEM190Q8WZ59 177 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 TCEAL7Q9BRU2 100 aa13.15□□□□□ -0.3
SREBF1-218ENST00000578469 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
SREBF1-218ENST00000578469 AKR1C3P42330 323 aa13.14□□□□□ -0.31
SREBF1-218ENST00000578469 ADIRFQ15847 76 aa13.14□□□□□ -0.31
SREBF1-218ENST00000578469 LEMD1Q68G75 181 aa13.14□□□□□ -0.31
SREBF1-218ENST00000578469 BLNKQ8WV28 456 aa13.14□□□□□ -0.31
SREBF1-218ENST00000578469 TUBA4BQ9H853 241 aa13.14□□□□□ -0.31
SREBF1-218ENST00000578469 ZNF98A6NK75 572 aa13.13□□□□□ -0.31
SREBF1-218ENST00000578469 GGTLC3B5MD39 225 aa13.13□□□□□ -0.31
SREBF1-218ENST00000578469 IGLV1-40P01703 118 aa13.13□□□□□ -0.31
SREBF1-218ENST00000578469 CRYBB3P26998 211 aa13.13□□□□□ -0.31
SREBF1-218ENST00000578469 CFHR3Q02985 330 aa13.13□□□□□ -0.31
SREBF1-218ENST00000578469 SCGB2A2Q13296 93 aa13.13□□□□□ -0.31
SREBF1-218ENST00000578469 MT-ND4LP03901 98 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 RAB9AP51151 201 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
SREBF1-218ENST00000578469 RPL23P62829 140 aaKnown RBP13.12□□□□□ -0.31
SREBF1-218ENST00000578469 SLC35B1P78383 322 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 FAM209BQ5JX69 171 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 ZNF343Q6P1L6 599 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 TOMM20LQ6UXN7 152 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 ZNF329Q86UD4 541 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 CTDSP1Q9GZU7 261 aa13.12□□□□□ -0.31
SREBF1-218ENST00000578469 HELTA6NFD8 242 aa13.11□□□□□ -0.31
SREBF1-218ENST00000578469 TSPAN4O14817 238 aa13.11□□□□□ -0.31
SREBF1-218ENST00000578469 IGHG4P01861 327 aa13.11□□□□□ -0.31
SREBF1-218ENST00000578469 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
SREBF1-218ENST00000578469 ARL3P36405 182 aa13.11□□□□□ -0.31
SREBF1-218ENST00000578469 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-218ENST00000578469 ELOVL1Q9BW60 279 aa13.11□□□□□ -0.31
SREBF1-218ENST00000578469 MGAM2Q2M2H8 2515 aa13.11□□□□□ -0.31
SREBF1-218ENST00000578469 TENM1Q9UKZ4 2725 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
SREBF1-218ENST00000578469 PGPA6NDG6 321 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 C9JCJ5 164 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 C15orf54Q8N8G6 183 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 HIST1H2BAQ96A08 127 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 DERL1Q9BUN8 251 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 ZFAND3Q9H8U3 227 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 OTORQ9NRC9 128 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 TMEM242Q9NWH2 141 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 LY96Q9Y6Y9 160 aa13.1□□□□□ -0.31
SREBF1-218ENST00000578469 IGHV3-35A0A0C4DH35 117 aa13.09□□□□□ -0.31
SREBF1-218ENST00000578469 CXorf65A6NEN9 183 aa13.09□□□□□ -0.31
SREBF1-218ENST00000578469 SLC25A5P05141 298 aaKnown RBP13.09□□□□□ -0.31
SREBF1-218ENST00000578469 MYCNOSP40205 109 aa13.09□□□□□ -0.31
SREBF1-218ENST00000578469 RPL35P42766 123 aaKnown RBP13.09□□□□□ -0.31
SREBF1-218ENST00000578469 CNN1P51911 297 aaKnown RBP13.09□□□□□ -0.31
SREBF1-218ENST00000578469 KLK15Q9H2R5 256 aa13.09□□□□□ -0.31
SREBF1-218ENST00000578469 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
SREBF1-218ENST00000578469 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
SREBF1-218ENST00000578469 TMA7Q9Y2S6 64 aaKnown RBP13.09□□□□□ -0.31
SREBF1-218ENST00000578469 MEGF8Q7Z7M0 2845 aa13.08□□□□□ -0.31
SREBF1-218ENST00000578469 PPP5D1E7EU14 171 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 PEX7O00628 323 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 SNRPCP09234 159 aaKnown RBP13.08□□□□□ -0.32
SREBF1-218ENST00000578469 IGLC2P0DOY2 106 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 TAS2R60P59551 318 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 TMEM95Q3KNT9 176 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 RNF212Q495C1 297 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 LINC01551Q86U37 167 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 C3orf56Q8N813 242 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 OR4X2Q8NGF9 303 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 C2CD4CQ8TF44 421 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 METTL26Q96S19 204 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 Q9H3A6 140 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 EPDR1Q9UM22 224 aa13.08□□□□□ -0.32
SREBF1-218ENST00000578469 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 CLDN34H7C241 214 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 MRPS12O15235 138 aaKnown RBP13.07□□□□□ -0.32
SREBF1-218ENST00000578469 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
SREBF1-218ENST00000578469 ELANEP08246 267 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 PSMB8P28062 276 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 GNG4P50150 75 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 PDE6HQ13956 83 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 TEX38Q6PEX7 206 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 CMTM2Q8TAZ6 248 aa13.07□□□□□ -0.32
SREBF1-218ENST00000578469 ZNF418Q8TF45 676 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-218ENST00000578469 ANAPC16Q96DE5 110 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms