RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PHOX2AO14813 284 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BKO60814 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BJP06899 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BOP23527 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BBP33778 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BDP58876 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BCP62807 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 ATP5G2Q06055 141 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST2H2BEQ16778 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.53■■□□□ 1.04
LIMD2-203ENST00000578067 NHLRC2Q8NBF2 726 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 FRZBQ92765 325 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BHQ93079 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BNQ99877 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 HIST1H2BMQ99879 126 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 RNASE7Q9H1E1 156 aaKnown RBP21.53■■□□□ 1.04
LIMD2-203ENST00000578067 UBE2CO00762 179 aa21.52■■□□□ 1.04
LIMD2-203ENST00000578067 CLEC19AQ6UXS0 136 aa21.52■■□□□ 1.04
LIMD2-203ENST00000578067 LYPD1Q8N2G4 141 aa21.52■■□□□ 1.04
LIMD2-203ENST00000578067 ZNF414Q96IQ9 312 aa21.52■■□□□ 1.04
LIMD2-203ENST00000578067 C17orf77Q96MU5 243 aa21.52■■□□□ 1.04
LIMD2-203ENST00000578067 ZNF320A2RRD8 509 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 BMPR1BO00238 502 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 FABP9Q0Z7S8 132 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 EXOC3-AS1Q8N2X6 119 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 FMC1Q96HJ9 113 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 FAM223BA6NKX1 122 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 TRGC1P0CF51 173 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 DEFB112Q30KQ8 113 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 FAM223AQ8IWN6 122 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 CMTM2Q8TAZ6 248 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 CSMD1Q96PZ7 3565 aa21.51■■□□□ 1.03
LIMD2-203ENST00000578067 PLA2G2AP14555 144 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 S100A7P31151 101 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 RPEL1Q2QD12 228 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 IBA57Q5T440 356 aaKnown RBP21.5■■□□□ 1.03
LIMD2-203ENST00000578067 TOMM20LQ6UXN7 152 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 TRAV9-1A0A075B6T8 112 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 IGHV3-35A0A0C4DH35 117 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 AKR1D1P51857 326 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 BLCAPP62952 87 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 SMIM12Q96EX1 92 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 ATP6V0BQ99437 205 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 GNB4Q9HAV0 340 aa21.5■■□□□ 1.03
LIMD2-203ENST00000578067 SIGLEC15Q6ZMC9 328 aa21.49■■□□□ 1.03
LIMD2-203ENST00000578067 MBD6Q96DN6 1003 aa21.49■■□□□ 1.03
LIMD2-203ENST00000578067 USP9YO00507 2555 aaPredicted RBP21.49■■□□□ 1.03
LIMD2-203ENST00000578067 TRGV3P03979 118 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 NDUFA6P56556 154 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 SGK494Q96LW2 274 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 GPR82Q96P67 336 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 ZFAND3Q9H8U3 227 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 J3QKU1 62 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 RPL7P18124 248 aaKnown RBP21.48■■□□□ 1.03
LIMD2-203ENST00000578067 PDE6HQ13956 83 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 Q96MF0 132 aa21.48■■□□□ 1.03
LIMD2-203ENST00000578067 BRI3O95415 125 aa21.47■■□□□ 1.03
LIMD2-203ENST00000578067 PPIFP30405 207 aaKnown RBP21.47■■□□□ 1.03
LIMD2-203ENST00000578067 PRSS57Q6UWY2 283 aa21.47■■□□□ 1.03
LIMD2-203ENST00000578067 POLQO75417 2590 aa21.47■■□□□ 1.03
LIMD2-203ENST00000578067 FAM231DQ6ZW35 169 aa21.46■■□□□ 1.03
LIMD2-203ENST00000578067 NOL4LQ96MY1 436 aaPredicted RBP21.46■■□□□ 1.03
LIMD2-203ENST00000578067 PTPN13Q12923 2485 aa21.46■■□□□ 1.03
LIMD2-203ENST00000578067 H3BUA1 57 aa21.46■■□□□ 1.03
LIMD2-203ENST00000578067 IGHV3OR16-8A0A075B7F1 116 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 FSHBP01225 129 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 LTAP01374 205 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 ACTL10Q5JWF8 245 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 OR8I2Q8N0Y5 310 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 IGHV4-59P01825 116 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 Q6ZS46 218 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 MLST8Q9BVC4 326 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 SERTAD4Q9NUC0 356 aa21.45■■□□□ 1.02
LIMD2-203ENST00000578067 MAP1AP78559 2803 aaPredicted RBP21.44■■□□□ 1.02
LIMD2-203ENST00000578067 TPPP2P59282 170 aa21.44■■□□□ 1.02
LIMD2-203ENST00000578067 RELQ04864 619 aaPredicted RBP21.44■■□□□ 1.02
LIMD2-203ENST00000578067 GOLT1AQ6ZVE7 132 aa21.44■■□□□ 1.02
LIMD2-203ENST00000578067 KRTAP1-3Q8IUG1 177 aa21.44■■□□□ 1.02
LIMD2-203ENST00000578067 CSMD2Q7Z408 3487 aa21.43■■□□□ 1.02
LIMD2-203ENST00000578067 ZNF705GA8MUZ8 300 aaPredicted RBP21.43■■□□□ 1.02
LIMD2-203ENST00000578067 HOXA5P20719 270 aa21.43■■□□□ 1.02
LIMD2-203ENST00000578067 IER3P46695 156 aa21.43■■□□□ 1.02
LIMD2-203ENST00000578067 RPL15P61313 204 aaKnown RBP21.43■■□□□ 1.02
LIMD2-203ENST00000578067 CELSR1Q9NYQ6 3014 aa21.43■■□□□ 1.02
LIMD2-203ENST00000578067 RAB9AP51151 201 aa21.42■■□□□ 1.02
LIMD2-203ENST00000578067 AAMDCQ9H7C9 122 aa21.42■■□□□ 1.02
LIMD2-203ENST00000578067 KMT2BQ9UMN6 2715 aaPredicted RBP21.42■■□□□ 1.02
LIMD2-203ENST00000578067 CR1P17927 2039 aa21.42■■□□□ 1.02
LIMD2-203ENST00000578067 CENPEQ02224 2701 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 PSG9Q00887 426 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 PRR27Q6MZM9 219 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 NUDT10Q8NFP7 164 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 NUDT11Q96G61 164 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 USMG5Q96IX5 58 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 TRBV6-1A0A0K0K1D8 114 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 GATCO43716 136 aaKnown RBP21.41■■□□□ 1.02
LIMD2-203ENST00000578067 IGLV2-11P01706 119 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 C9orf139Q6ZV77 190 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 Q86TA4 180 aa21.41■■□□□ 1.02
LIMD2-203ENST00000578067 PSMG3-AS1Q96PY0 264 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms