RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 LGI3Q8N145 548 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 LINC00612Q8N6U2 182 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 LHFPL5Q8TAF8 219 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 ZFAND1Q8TCF1 268 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 TMEM222Q9H0R3 208 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 U3KQ87 197 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 SMIM31A0A1B0GVY4 71 aa11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 TGFBR1P36897 503 aa11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 RNASE10Q5GAN6 216 aaKnown RBP11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 CCDC28AQ8IWP9 274 aa11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 SELENOHQ8IZQ5 122 aaKnown RBP11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 OR13C8Q8NGS7 320 aa11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 RBPMSQ93062 196 aaKnown RBP11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 VSIG2Q96IQ7 327 aa11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 TMPRSS5Q9H3S3 457 aa11.07□□□□□ -0.64
CTDNEP1-211ENST00000575783 H7BYZ3 331 aa11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 B3GALNT1O75752 331 aa11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 GPX4P36969 197 aaPredicted RBP11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 RPS19P39019 145 aaKnown RBP11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 TMEM268Q5VZI3 342 aa11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 OR1B1Q8NGR6 318 aa11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 GLYATL2Q8WU03 294 aa11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 TMEM70Q9BUB7 260 aa11.06□□□□□ -0.64
CTDNEP1-211ENST00000575783 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 TEX13DA0A0J9YY54 714 aaPredicted RBP11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 SNURFLB1AK76 121 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 CD3DP04234 171 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 ORM2P19652 201 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 SCGB2B2Q4G0G5 96 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 IZUMO2Q6UXV1 221 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 OR8A1Q8NGG7 326 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 MARCH1Q8TCQ1 289 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 DTD1Q8TEA8 209 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 TRGV9Q99603 122 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 DNAH8Q96JB1 4490 aa11.05□□□□□ -0.64
CTDNEP1-211ENST00000575783 TNFAIP8O95379 198 aa11.04□□□□□ -0.64
CTDNEP1-211ENST00000575783 CDKN1BP46527 198 aa11.04□□□□□ -0.64
CTDNEP1-211ENST00000575783 OR4D5Q8NGN0 318 aa11.04□□□□□ -0.64
CTDNEP1-211ENST00000575783 TERB2Q8NHR7 220 aa11.04□□□□□ -0.64
CTDNEP1-211ENST00000575783 DEFB104AQ8WTQ1 72 aa11.04□□□□□ -0.64
CTDNEP1-211ENST00000575783 RBKSQ9H477 322 aa11.04□□□□□ -0.64
CTDNEP1-211ENST00000575783 COMMD3Q9UBI1 195 aa11.04□□□□□ -0.64
CTDNEP1-211ENST00000575783 TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 ANKRD65E5RJM6 399 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 SULT1A3P0DMM9 295 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 SULT1A4P0DMN0 295 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 GGNBP1Q5YKI7 109 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 GPR82Q96P67 336 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 CACFD1Q9UGQ2 172 aa11.03□□□□□ -0.64
CTDNEP1-211ENST00000575783 IGKV1OR2-108A0A075B7D4 117 aa11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 CFDP00746 253 aaPredicted RBP11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 GATA2P23769 480 aaPredicted RBP11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 Q6ZTI0 123 aa11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 OR4D10Q8NGI6 311 aa11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 NAA60Q9H7X0 242 aa11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 MSRB1Q9NZV6 116 aa11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 FAM30AQ9NZY2 134 aa11.02□□□□□ -0.65
CTDNEP1-211ENST00000575783 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 LRRC20Q8TCA0 184 aa11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 RTBDNQ9BSG5 229 aaPredicted RBP11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 TMEM147Q9BVK8 224 aa11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 VCX3BQ9H321 246 aa11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 PAIP2BQ9ULR5 123 aaKnown RBP11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 C14orf166Q9Y224 244 aaKnown RBP11.01□□□□□ -0.65
CTDNEP1-211ENST00000575783 FAT3Q8TDW7 4589 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 APOA1P02647 267 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 CXCL3P19876 107 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 LSM3P62310 102 aaKnown RBP11□□□□□ -0.65
CTDNEP1-211ENST00000575783 NEDD8Q15843 81 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 PSG3Q16557 428 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 PARD6GQ9BYG4 376 aaPredicted RBP11□□□□□ -0.65
CTDNEP1-211ENST00000575783 HSPB7Q9UBY9 170 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 LY96Q9Y6Y9 160 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
CTDNEP1-211ENST00000575783 S100A7P31151 101 aa10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 ATP5IP56385 69 aaPredicted RBP10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 TMEM182Q6ZP80 229 aaPredicted RBP10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 THAP8Q8NA92 274 aa10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 BPIFCQ8NFQ6 507 aa10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 RPUSD4Q96CM3 377 aaKnown RBP10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 PRR13Q9NZ81 148 aa10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 ICOSQ9Y6W8 199 aa10.99□□□□□ -0.65
CTDNEP1-211ENST00000575783 J3KRW8 73 aa10.98□□□□□ -0.65
CTDNEP1-211ENST00000575783 PAX4O43316 350 aa10.98□□□□□ -0.65
CTDNEP1-211ENST00000575783 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
CTDNEP1-211ENST00000575783 LYPD5Q6UWN5 251 aa10.98□□□□□ -0.65
CTDNEP1-211ENST00000575783 OR52I2Q8NH67 350 aa10.98□□□□□ -0.65
CTDNEP1-211ENST00000575783 C20orf144Q9BQM9 153 aa10.98□□□□□ -0.65
CTDNEP1-211ENST00000575783 RAB26Q9ULW5 256 aa10.98□□□□□ -0.65
CTDNEP1-211ENST00000575783 HPGDSO60760 199 aa10.97□□□□□ -0.65
CTDNEP1-211ENST00000575783 RAB3DO95716 219 aa10.97□□□□□ -0.65
CTDNEP1-211ENST00000575783 TBPP20226 339 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms