RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 BPIFA4PQ86YQ2 179 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 LYPD1Q8N2G4 141 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 C17orf77Q96MU5 243 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 RAB1BQ9H0U4 201 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 HILPDAQ9Y5L2 63 aa7.06□□□□□ -1.28
NCBP3-204ENST00000574911 CCL21O00585 134 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 LY6HO94772 140 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 CDSNQ15517 529 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 FAM120AOSQ5T036 256 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 LCN12Q6JVE5 192 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 OR4F17Q8NGA8 305 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 IGFBPL1Q8WX77 278 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 ATMQ13315 3056 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 KALRNO60229 2985 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 TOX4O94842 621 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 HLA-DRB1P01911 266 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 CD24P25063 80 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 COL8A1P27658 744 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 CEACAM3P40198 252 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 KLRD1Q13241 179 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
NCBP3-204ENST00000574911 RNF125Q96EQ8 232 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 NDFIP1Q9BT67 221 aa7.05□□□□□ -1.28
NCBP3-204ENST00000574911 LOC105371242A0A075B767 164 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 LOC102724200A0A096LPH7 203 aaPredicted RBP7.04□□□□□ -1.28
NCBP3-204ENST00000574911 NPIPB5A8MRT5 1133 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 PRTN3P24158 256 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 G0S2P27469 103 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 ADORA2A-AS1P86434 159 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 C5orf64Q2M2E5 130 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 KLF17Q5JT82 389 aaPredicted RBP7.04□□□□□ -1.28
NCBP3-204ENST00000574911 C11orf71Q6IPW1 123 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 KIR3DL3Q8N743 410 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 KLHDC1Q8N7A1 406 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 ZC2HC1AQ96GY0 325 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 TIMD4Q96H15 378 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 ZNF414Q96IQ9 312 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 ZNF48Q96MX3 618 aaPredicted RBP7.04□□□□□ -1.28
NCBP3-204ENST00000574911 FANCD2OSQ96PS1 177 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 PSG8Q9UQ74 426 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 ZFP30Q9Y2G7 519 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 PLXNB1O43157 2135 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 IGLV11-55A0A075B6I3 123 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 TRAV30A0A087WSZ9 112 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 IL4P05112 153 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 ATOH7Q8N100 152 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 GATD1Q8NB37 220 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 MALRD1Q5VYJ5 2156 aa7.04□□□□□ -1.28
NCBP3-204ENST00000574911 TRAV9-2A0A087WT02 112 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 CHEK1O14757 476 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 ZNF25P17030 456 aaPredicted RBP7.03□□□□□ -1.28
NCBP3-204ENST00000574911 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
NCBP3-204ENST00000574911 PSG3Q16557 428 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 MAJINQ3KP22 176 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 SPATA12Q7Z6I5 190 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 NEU4Q8WWR8 484 aaPredicted RBP7.03□□□□□ -1.28
NCBP3-204ENST00000574911 LPAR2Q9HBW0 351 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 C1RLQ9NZP8 487 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 ZFHX2Q9C0A1 2572 aaPredicted RBP7.03□□□□□ -1.28
NCBP3-204ENST00000574911 RP1L1Q8IWN7 2480 aaPredicted RBP7.03□□□□□ -1.28
NCBP3-204ENST00000574911 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 C20orf202A1L168 122 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 F8W735 103 aaPredicted RBP7.03□□□□□ -1.28
NCBP3-204ENST00000574911 M0QZ24 198 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 CRIP1P50238 77 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 Q56UQ5 140 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 ZNF562Q6V9R5 426 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 Q6ZN92 141 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 TTC9CQ8N5M4 171 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 CLEC5AQ9NY25 188 aa7.03□□□□□ -1.28
NCBP3-204ENST00000574911 SH2D7A6NKC9 451 aaPredicted RBP7.02□□□□□ -1.29
NCBP3-204ENST00000574911 K7EQM0 130 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 CRXO43186 299 aaPredicted RBP7.02□□□□□ -1.29
NCBP3-204ENST00000574911 GNG7O60262 68 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 HNRNPA3P51991 378 aaKnown RBP7.02□□□□□ -1.29
NCBP3-204ENST00000574911 MFAP4P55083 255 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 ZNF124Q15973 351 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 BATFQ16520 125 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 Q8N6K4 173 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 TXN2Q99757 166 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 ROS1P08922 2347 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 LINC00614P0C842 121 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 SFTPCP11686 197 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 NDPQ00604 133 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 GAGE1Q13065 139 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 PDE6HQ13956 83 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 HES1Q14469 280 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 COL5A1-AS1Q5SY13 56 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 DMRTA1Q5VZB9 504 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 BCL6BQ8N143 479 aaPredicted RBP7.02□□□□□ -1.29
NCBP3-204ENST00000574911 DYNAPQ8N1N2 210 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 ARPC1AQ92747 370 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 ASCL2Q99929 193 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 TMEM208Q9BTX3 173 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 TMEM70Q9BUB7 260 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 MSRB2Q9Y3D2 182 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 S4R3C0 116 aa7.02□□□□□ -1.29
NCBP3-204ENST00000574911 PKDREJQ9NTG1 2253 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms