RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 Q9HAA7 133 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 WNK3Q9BYP7 1800 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 TMEM158Q8WZ71 300 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE12BA1L429 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE12JA6NER3 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE7O76087 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE12FP0CL80 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE12GP0CL81 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE12IP0CL82 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 CXCL2P19875 107 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE1Q13065 139 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE4Q13068 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE5Q13069 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 GAGE13Q4V321 117 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 TMEM155Q4W5P6 130 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 MED13LQ71F56 2210 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 CTAG1AP78358 180 aa7.78□□□□□ -1.16
USP6-204ENST00000572949 MPTX1A8MV57 137 aa7.77□□□□□ -1.16
USP6-204ENST00000572949 CRLF1O75462 422 aa7.77□□□□□ -1.16
USP6-204ENST00000572949 DEPPQ9NTK1 212 aa7.77□□□□□ -1.16
USP6-204ENST00000572949 IGKV1OR2-108A0A075B7D4 117 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 J3QLI3 93 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 OVOL3O00110 214 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 CSTL1Q9H114 145 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 A0A087WWL8 130 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 TRBV5-3A0A0A0MS03 114 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 IGHV3-16A0A0C4DH30 117 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 ANGP03950 147 aaKnown RBP7.77□□□□□ -1.17
USP6-204ENST00000572949 HEPN1Q6WQI6 88 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 hADV29S1A0JD25 119 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 TCRAP04437 139 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 COL8A2P25067 703 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 PLA2G10O15496 165 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 IRF3Q14653 427 aa7.77□□□□□ -1.17
USP6-204ENST00000572949 PINLYPA6NC86 204 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 PAX9P55771 341 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 SCRT1Q9BWW7 348 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 KLK5Q9Y337 293 aaPredicted RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 EML6Q6ZMW3 1958 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 A0A096LPF7 62 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 RNF5Q99942 180 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 A8MWV9 139 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 PSG3Q16557 428 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 KLF17Q5JT82 389 aaPredicted RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 SLC25A48Q6ZT89 311 aaKnown RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 MED13Q9UHV7 2174 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 TICRRQ7Z2Z1 1910 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 FREM1Q5H8C1 2179 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 PTPRFP10586 1907 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 HELZP42694 1942 aaKnown RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 DUTP33316 252 aaKnown RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 C14orf178Q8N769 122 aaPredicted RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 A8MXK9 166 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 CCL18P55774 89 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 PMVKQ15126 192 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 C5orf30Q96GV9 206 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 SPXQ9BT56 116 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 REG4Q9BYZ8 158 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 TSSC4Q9Y5U2 329 aaPredicted RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 TSC2P49815 1807 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 NTN3O00634 580 aaPredicted RBP7.76□□□□□ -1.17
USP6-204ENST00000572949 PFN2P35080 140 aa7.76□□□□□ -1.17
USP6-204ENST00000572949 A0A1B0GWJ7 208 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 FOXL1Q12952 345 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 TCTEX1D4Q5JR98 221 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 TIMM21Q9BVV7 248 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 NIT1Q86X76 327 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 CCL20P78556 96 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 SPINK13Q1W4C9 94 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 PUSL1Q8N0Z8 303 aaKnown RBP7.75□□□□□ -1.17
USP6-204ENST00000572949 TRBV6-7A0A0A0MS04 114 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 IGKV1D-43A0A0B4J1Z2 117 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 COL11A2P13942 1736 aaPredicted RBP7.75□□□□□ -1.17
USP6-204ENST00000572949 TRAV9-1A0A075B6T8 112 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 DKK1O94907 266 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 CD55P08174 381 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 IFI27L1Q96BM0 104 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 IGHV1-69DA0A0B4J2H0 117 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 IGHV1-69P01742 117 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 LINC00271P0C7V0 271 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 IFITM2Q01629 132 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 DMRTC2Q8IXT2 367 aaPredicted RBP7.75□□□□□ -1.17
USP6-204ENST00000572949 RALGAPA2Q2PPJ7 1873 aa7.75□□□□□ -1.17
USP6-204ENST00000572949 CLPSL1A2RUU4 121 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 SLAQ13239 276 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 NPDC1Q9NQX5 325 aaPredicted RBP7.74□□□□□ -1.17
USP6-204ENST00000572949 IGLV3-12A0A075B6K2 115 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 INAFM2P0DMQ5 153 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 GAGE6Q13070 117 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 LIME1Q9H400 295 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 PRSS29PA6NIE9 313 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 FAM90A9PA6NNJ1 464 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 KNCNA6PVL3 124 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 RHODO00212 210 aa7.74□□□□□ -1.17
USP6-204ENST00000572949 C1QCP02747 245 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms