RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GTSCR1Q86UQ5 136 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 TMEM219Q86XT9 240 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 R4GMQ9 66 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 DOPEY1Q5JWR5 2465 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 F8P00451 2351 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 UMAD1C9J7I0 102 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 GABARAPH6UMI1 98 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 MT-ND6P03923 174 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 DEFA4P12838 97 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 TPT1P13693 172 aaKnown RBP5.34□□□□□ -1.55
SMG1-217ENST00000569764 HILS1P60008 231 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 MRPL54Q6P161 138 aaKnown RBP5.34□□□□□ -1.55
SMG1-217ENST00000569764 MLST8Q9BVC4 326 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 ROS1P08922 2347 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 IGHV1-69DA0A0B4J2H0 117 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 TRBV5-5A0A0J9YX44 114 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 TEX48A0A1B0GUV7 120 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 SLC17A2O00624 439 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 IGHV1-69P01742 117 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 SUMO2P61956 95 aaKnown RBP5.34□□□□□ -1.55
SMG1-217ENST00000569764 SLC35E4Q6ICL7 350 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 DNM1P46Q6ZS02 220 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 GAPTQ8N292 157 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 A0A0B4J2A0 478 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 RSPO1Q2MKA7 263 aaPredicted RBP5.34□□□□□ -1.55
SMG1-217ENST00000569764 C10orf91Q5T1B1 145 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 LINC00528Q8N1L1 170 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 OR5A1Q8NGJ0 315 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 OR4A5Q8NH83 315 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 SPATA25Q9BR10 227 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 ZNF286AQ9HBT8 521 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 SHPKQ9UHJ6 478 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 LHFPL6Q9Y693 200 aa5.34□□□□□ -1.55
SMG1-217ENST00000569764 HELZ2Q9BYK8 2649 aaKnown RBP5.34□□□□□ -1.56
SMG1-217ENST00000569764 SAA2-SAA4A0A096LPE2 208 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 OR2T8A6NH00 312 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 KBTBD11O94819 623 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 IGLV1-44P01699 117 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 IGHV1-46P01743 117 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 HLA-DQB1P01920 261 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 SAA4P35542 130 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 CACNG7P62955 275 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 LCN15Q6UWW0 184 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 SIGLECL1Q8N7X8 197 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 FRZBQ92765 325 aa5.34□□□□□ -1.56
SMG1-217ENST00000569764 TRBV5-7A0A0A0MS05 114 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 TRAV1-2A0A0B4J238 106 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 SHISA9B4DS77 424 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 BCL3P20749 454 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 PGA5P0DJD9 388 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 INSL3P51460 131 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 TREML4Q6UXN2 200 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 NEGR1Q7Z3B1 354 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 KIR2DL4Q99706 377 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 PNRC2Q9NPJ4 139 aaKnown RBP5.33□□□□□ -1.56
SMG1-217ENST00000569764 ESM1Q9NQ30 184 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 RPUSD1Q9UJJ7 312 aaKnown RBP5.33□□□□□ -1.56
SMG1-217ENST00000569764 ARHGAP21Q5T5U3 1957 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 RBMY1BA6NDE4 496 aaKnown RBP5.33□□□□□ -1.56
SMG1-217ENST00000569764 RBMY1EA6NEQ0 496 aaKnown RBP5.33□□□□□ -1.56
SMG1-217ENST00000569764 RBMY1DP0C7P1 496 aaKnown RBP5.33□□□□□ -1.56
SMG1-217ENST00000569764 RBMY1A1P0DJD3 496 aaKnown RBP5.33□□□□□ -1.56
SMG1-217ENST00000569764 PRSS3P35030 304 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 MSMO1Q15800 293 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 MPV17LQ2QL34 196 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 CRIP3Q6Q6R5 217 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 DPPA3Q6W0C5 159 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 SUMF2Q8NBJ7 301 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 CCL13Q99616 98 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 WASHC3Q9Y3C0 194 aa5.33□□□□□ -1.56
SMG1-217ENST00000569764 MED12LQ86YW9 2145 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 RER1O15258 196 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 HRASP01112 189 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 KRASP01116 189 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 GYPAP02724 150 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 C9orf66Q5T8R8 295 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 SLC25A26Q70HW3 274 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 LYPD6Q86Y78 171 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 OR51T1Q8NGJ9 327 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 IGHV4-61A0A0C4DH41 118 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 A0A1B0GX51 115 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 SMKR1H3BMG3 65 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 RBP4P02753 201 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 CX3CL1P78423 397 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 ATP5G2Q06055 141 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 NSUN5P1Q3KNT7 163 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 SPATA45Q537H7 98 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 FAM201AQ5SY85 155 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 ZNF880Q6PDB4 577 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 SLC25A48Q6ZT89 311 aaKnown RBP5.32□□□□□ -1.56
SMG1-217ENST00000569764 FSTL3O95633 263 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 TSPOP30536 169 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 PSG9Q00887 426 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 LY6EQ16553 131 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 FGFBP3Q8TAT2 258 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 FMC1Q96HJ9 113 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 MOB4Q9Y3A3 225 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 HIVEP3Q5T1R4 2406 aa5.32□□□□□ -1.56
SMG1-217ENST00000569764 ITPR1Q14643 2758 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms