RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ERVFC1-1P60608 527 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 GAMTQ14353 236 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 PSG5Q15238 335 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 RPEL1Q2QD12 228 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 GCSAMLQ5JQS6 135 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 CYB5R2Q6BCY4 276 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 PVRIGQ6DKI7 326 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 FAM53AQ6NSI3 398 aaPredicted RBP4.19□□□□□ -1.74
CAPN3-217ENST00000567817 S100A7AQ86SG5 101 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 MRPL52Q86TS9 123 aaKnown RBP4.19□□□□□ -1.74
CAPN3-217ENST00000567817 TGIF2LXQ8IUE1 241 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 MMD2Q8IY49 270 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 FAM216BQ8N7L0 139 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 THAP8Q8NA92 274 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 NECAP1Q8NC96 275 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 DEFB108BQ8NET1 73 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 OR1L6Q8NGR2 347 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 SSMEM1Q8WWF3 244 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 HINT2Q9BX68 163 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 GNB1LQ9BYB4 327 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 NPFFR1Q9GZQ6 430 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 ZNF430Q9H8G1 570 aaPredicted RBP4.19□□□□□ -1.74
CAPN3-217ENST00000567817 DYNLRB1Q9NP97 96 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 RNF24Q9Y225 148 aa4.19□□□□□ -1.74
CAPN3-217ENST00000567817 AMMECR1Q9Y4X0 333 aaPredicted RBP4.19□□□□□ -1.74
CAPN3-217ENST00000567817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.19□□□□□ -1.74
CAPN3-217ENST00000567817 ABCA1O95477 2261 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.18□□□□□ -1.74
CAPN3-217ENST00000567817 TCRBV4S1A1TA0A5B7 111 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 DPRXA6NFQ7 191 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 COX7A2P2O60397 106 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 OR7C2O60412 319 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 HLA-DQA1P01909 254 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 TFF1P04155 84 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 IGKV1-16P04430 117 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 HIST1H1EP10412 219 aaKnown RBP4.18□□□□□ -1.74
CAPN3-217ENST00000567817 DDTP30046 118 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 OR10J1P30954 320 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 PPOXP50336 477 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 TPPP2P59282 170 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 CX3CL1P78423 397 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 BSPH1Q075Z2 132 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 Q0VG73 95 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 TMEM155Q4W5P6 130 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 CENPWQ5EE01 88 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 OR10J3Q5JRS4 329 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 FAM162BQ5T6X4 162 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 FAM231DQ6ZW35 169 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 RPRMLQ8N4K4 120 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 GBGT1Q8N5D6 347 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 OCC1Q8TAD7 63 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 TMEM37Q8WXS4 190 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 ST6GALNAC6Q969X2 333 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 PERPQ96FX8 193 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 SLC25A33Q9BSK2 321 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 MRPL20Q9BYC9 149 aaKnown RBP4.18□□□□□ -1.74
CAPN3-217ENST00000567817 DNAJC4Q9NNZ3 241 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 YTHDF2Q9Y5A9 579 aaKnown RBP4.18□□□□□ -1.74
CAPN3-217ENST00000567817 MED12LQ86YW9 2145 aa4.18□□□□□ -1.74
CAPN3-217ENST00000567817 ANK3Q12955 4377 aaKnown RBP4.17□□□□□ -1.74
CAPN3-217ENST00000567817 IGHV1-69-2A0A0G2JMI3 117 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 SRRM4A7MD48 611 aaKnown RBP4.17□□□□□ -1.74
CAPN3-217ENST00000567817 SCGB2A1O75556 95 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 REG1AP05451 166 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 CRYGCP07315 174 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 IGHV1-8P0DP01 117 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 GZMBP10144 247 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 SELLP14151 372 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 S100A7P31151 101 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 PLP1P60201 277 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 RAB4BP61018 213 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 SSTP61278 116 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 UBE2L3P68036 154 aaKnown RBP4.17□□□□□ -1.74
CAPN3-217ENST00000567817 CCL8P80075 99 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 SPRNQ5BIV9 151 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 PDZD11Q5EBL8 140 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 FAM201AQ5SY85 155 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 GFI1BQ5VTD9 330 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 C10orf113Q5VZT2 155 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 MIR17HGQ75NE6 70 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 ATP5L2Q7Z4Y8 100 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 ZCCHC24Q8N2G6 241 aaKnown RBP4.17□□□□□ -1.74
CAPN3-217ENST00000567817 CMTM2Q8TAZ6 248 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 CCL17Q92583 94 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 LEAP2Q969E1 77 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 TRGV9Q99603 122 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 TMEM133Q9H2Q1 129 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 YAE1D1Q9NRH1 226 aa4.17□□□□□ -1.74
CAPN3-217ENST00000567817 SOX21Q9Y651 276 aaPredicted RBP4.17□□□□□ -1.74
CAPN3-217ENST00000567817 TRBV20OR9-2A0A075B6H5 130 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 SMIM27A0A1W2PRY6 76 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 PSMB11A5LHX3 300 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 FAM231BA6NCW3 169 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 CRISP2P16562 243 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 CCL3L1P16619 93 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 RAB4AP20338 218 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 CRYBB3P26998 211 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 LOXP28300 417 aaPredicted RBP4.16□□□□□ -1.74
CAPN3-217ENST00000567817 BRS3P32247 399 aa4.16□□□□□ -1.74
CAPN3-217ENST00000567817 DLX6P56179 175 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms