RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 NPC2P61916 151 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 A0A1W2PPM0 123 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 TAL2Q16559 108 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 RFNGQ9Y644 331 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 CNOT1A5YKK6 2376 aaKnown RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 GREM1O60565 184 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 VDAC2P45880 294 aaPredicted RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 IGLV3-21P80748 117 aaPredicted RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 C9orf139Q6ZV77 190 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 OOSP1A8MZH6 123 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 BTCP35070 178 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 IGKV1-8A0A0C4DH67 115 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 SRRM4A7MD48 611 aaKnown RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 NUP210Q8TEM1 1887 aaPredicted RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 COL18A1P39060 1754 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 IGHV3OR16-13A0A075B7E8 117 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 IGHV3-74A0A0B4J1X5 117 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 MBNL3Q9NUK0 354 aaKnown RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 RHODO00212 210 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 NDUFS6O75380 124 aaKnown RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 RNF5Q99942 180 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 WDR83OSQ9Y284 106 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 KIAA1549LQ6ZVL6 1849 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 hDV102S1A0JD36 115 aa4.21□□□□□ -1.73
SMG1-211ENST00000565324 ATOX1O00244 68 aa4.21□□□□□ -1.73
SMG1-211ENST00000565324 LYZL1Q6UWQ5 148 aa4.21□□□□□ -1.73
SMG1-211ENST00000565324 ZNF114Q8NC26 417 aa4.21□□□□□ -1.73
SMG1-211ENST00000565324 IGHV2-70P01814 119 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 COX6A1P12074 109 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 BSPH1Q075Z2 132 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 LSM4Q9Y4Z0 139 aaKnown RBP4.21□□□□□ -1.74
SMG1-211ENST00000565324 ROS1P08922 2347 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 TRAV41A0A0B4J266 112 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 TREML4Q6UXN2 200 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 PROB1E7EW31 1015 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 IGFBP6P24592 240 aaPredicted RBP4.21□□□□□ -1.74
SMG1-211ENST00000565324 CDKN1BP46527 198 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 LCN12Q6JVE5 192 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 NCOA6Q14686 2063 aaPredicted RBP4.21□□□□□ -1.74
SMG1-211ENST00000565324 K7EP34 96 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 FOXG1P55316 489 aaPredicted RBP4.21□□□□□ -1.74
SMG1-211ENST00000565324 C1orf53Q5VUE5 145 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 C1QL2Q7Z5L3 287 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 IGHV3-66A0A0C4DH42 116 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 ZNF664Q8N3J9 261 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 NKAPP1Q8N9T2 125 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 PLA2G2FQ9BZM2 168 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 LIME1Q9H400 295 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 PRO1854Q9UHT4 67 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 IGKV2-40A0A087WW87 121 aaPredicted RBP4.21□□□□□ -1.74
SMG1-211ENST00000565324 IGHV3-35A0A0C4DH35 117 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 SH2D1AO60880 128 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 IGKV2D-40P01614 121 aaPredicted RBP4.21□□□□□ -1.74
SMG1-211ENST00000565324 FGF6P10767 208 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 CRYBA2P53672 197 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 TCF20Q9UGU0 1960 aaKnown RBP4.21□□□□□ -1.74
SMG1-211ENST00000565324 PSG7Q13046 419 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 ZNF876PQ49A33 203 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 SMIM10L1P0DMW3 83 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 COX8AP10176 69 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 TMEM75Q8N9X5 138 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 SMIM10Q96HG1 83 aa4.21□□□□□ -1.74
SMG1-211ENST00000565324 PMS2P5A8MQ11 134 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 PYYP10082 97 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 C1orf122Q6ZSJ8 110 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 KLHDC3Q9BQ90 382 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 I3L3M4 83 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 SIP14410 1827 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 ZC2HC1BQ5TFG8 222 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 TMEM256Q8N2U0 113 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 TSSC4Q9Y5U2 329 aaPredicted RBP4.2□□□□□ -1.74
SMG1-211ENST00000565324 A0A0U1RRA0 63 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 ATP5G1P05496 136 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 COLCA1Q6ZS62 124 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 CD55P08174 381 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 CECR9P0C854 216 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 SRSF3P84103 164 aaKnown RBP4.2□□□□□ -1.74
SMG1-211ENST00000565324 LGALS9BQ3B8N2 356 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 LGALS9CQ6DKI2 356 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 GLMPQ8WWB7 406 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 USMG5Q96IX5 58 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 DEPPQ9NTK1 212 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 IGHV3-23P01764 117 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 TCRAP04437 139 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 IMMP1LQ96LU5 166 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 SPXQ9BT56 116 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 TRGV1A0A0A0MS02 117 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 FAM223BA6NKX1 122 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 WNT2P09544 360 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 CEACAM8P31997 349 aaPredicted RBP4.2□□□□□ -1.74
SMG1-211ENST00000565324 MINOS1Q5TGZ0 78 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 FAM223AQ8IWN6 122 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 STPG4Q8N801 248 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 SMRP1Q8NCR6 262 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 SPANXB1Q9NS25 103 aaPredicted RBP4.2□□□□□ -1.74
SMG1-211ENST00000565324 MINOS1-NBL1R4GNA1 71 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 CEND1Q8N111 149 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 CFPP27918 469 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 BVES-AS1Q5T3Y7 98 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms