RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 RPEL1Q2QD12 228 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 ZNF329Q86UD4 541 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 Q8N6K4 173 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 DPF1Q92782 380 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 IGF2BP2-AS1Q96M15 143 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 ZNF48Q96MX3 618 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 CHRDL1Q9BU40 450 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 NIT2Q9NQR4 276 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 C1RLQ9NZP8 487 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 TMEM14CQ9P0S9 112 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 HIGD1AQ9Y241 93 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 IGHV2-70DA0A0C4DH43 119 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 PCP4L1A6NKN8 68 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 K7EIM0 57 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 PEX7O00628 323 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 PSG1P11464 419 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 FCGR2BP31994 310 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 IER3P46695 156 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 RUSC1-AS1Q66K80 236 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 FAM231DQ6ZW35 169 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 TTC9CQ8N5M4 171 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 SPATA25Q9BR10 227 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 SSBP4Q9BWG4 385 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 LPAR2Q9HBW0 351 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 THYN1Q9P016 225 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 MRPL27Q9P0M9 148 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 EPDR1Q9UM22 224 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 KLF12Q9Y4X4 402 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 CHD8Q9HCK8 2581 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 NDUFS7O75251 213 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 CSN3P07498 182 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 FAM106CPP0CH98 169 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 RD3LP0DJH9 198 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 APELAP0DMC3 54 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 LMO4P61968 165 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 COTL1Q14019 142 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 TMEM183BQ1AE95 376 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 PRR31Q5SQ13 230 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 IBA57Q5T440 356 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 GFI1BQ5VTD9 330 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 BAGE2Q86Y30 109 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 OR10D4PQ8NGN7 298 aa5.72□□□□□ -1.49
HERPUD1-209ENST00000564678 ABCA1O95477 2261 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 PGPA6NDG6 321 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 SLC17A3O00476 420 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 TOMM40O96008 361 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 IGKV1-17P01599 117 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 HIST1H1EP10412 219 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 GP9P14770 177 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 BRS3P32247 399 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 UQCRFS1P47985 274 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 RANP62826 216 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 CX3CL1P78423 397 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 OR5I1Q13606 314 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 PYY3Q5JQD4 70 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 C5orf17Q8NAS9 161 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 IGFBPL1Q8WX77 278 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 HIST1H2BLQ99880 126 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 GNB1LQ9BYB4 327 aa5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 SLC25A39Q9BZJ4 359 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-209ENST00000564678 IGLV11-55A0A075B6I3 123 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 IGHV3-21A0A0B4J1V1 117 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 SMIM27A0A1W2PRY6 76 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 MT-ND6P03923 174 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 FABP4P15090 132 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 HIST1H1BP16401 226 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 SUMO2P61956 95 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 UBE2G1P62253 170 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 UBE2V1Q13404 147 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 ZNF600Q6ZNG1 722 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 C19orf35Q6ZS72 473 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 LYPD1Q8N2G4 141 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 ARPC1AQ92747 370 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 PACRGQ96M98 296 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 GPR82Q96P67 336 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 BPESC1Q9GZL8 116 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 NCBP2LA6PVI3 153 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 C19orf84I3L1E1 186 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 HLA-DRB1P01911 266 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 SLC25A5P05141 298 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 MGST1P10620 155 aaKnown RBP5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 LYZP61626 148 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 KLK9Q2XQG4 91 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 RASL11AQ6T310 242 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 BPIFA4PQ86YQ2 179 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 DYNAPQ8N1N2 210 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 TMEM18Q96B42 140 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 FMC1Q96HJ9 113 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 SHANK2-AS3Q9BTD1 123 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 OTORQ9NRC9 128 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 KLK9Q9UKQ9 250 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 CACNA1AO00555 2505 aa5.7□□□□□ -1.5
HERPUD1-209ENST00000564678 WNK2Q9Y3S1 2297 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 A0A1W2PRD5 423 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 A0A1W2PRF3 423 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 A0A1W2PRM7 423 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 WI2-2373I1.2A0A1W2PRP0 233 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 ZNF705GA8MUZ8 300 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 VWC2LB2RUY7 222 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms