RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 HELZP42694 1942 aaKnown RBP5.13□□□□□ -1.59
CLK3-212ENST00000563418 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 C2orf70A6NJV1 201 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 FOXS1O43638 330 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 PATE4P0C8F1 98 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 CRYGSP22914 178 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 LYZL1Q6UWQ5 148 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 PLA2G2EQ9NZK7 142 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 RHODO00212 210 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 PYYP10082 97 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 UCNP55089 124 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 SLC25A53Q5H9E4 307 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 FAM214BQ7L5A3 538 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 TM2D2Q9BX73 214 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 UPK2O00526 184 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 ANXA2RQ3ZCQ2 193 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 ZNF501Q96CX3 271 aaPredicted RBP5.13□□□□□ -1.59
CLK3-212ENST00000563418 A0A0B4J2C4 111 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 H0Y8X5 98 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 SS18L1O75177 396 aaPredicted RBP5.12□□□□□ -1.59
CLK3-212ENST00000563418 ZNF138P52744 262 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 A0A087WX48 190 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 GFERP55789 205 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 PATE1Q8WXA2 126 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 WNT9BO14905 357 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 HERVK_113P63121 156 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 TMEM42Q69YG0 159 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 ACP7Q6ZNF0 438 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 ARHGEF17Q96PE2 2063 aaPredicted RBP5.12□□□□□ -1.59
CLK3-212ENST00000563418 LMO7DNF2Z398 122 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 IGKV1D-33P01593 117 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 IGKV1-33P01594 117 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 PPIFP30405 207 aaKnown RBP5.12□□□□□ -1.59
CLK3-212ENST00000563418 UBL5Q9BZL1 73 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 TRAV25A0A0B4J276 109 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 CFC1BP0CG36 223 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 CFC1P0CG37 223 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 FXYD2P54710 66 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 LINC00527Q9UJ94 153 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 CHCHD2Q9Y6H1 151 aaPredicted RBP5.12□□□□□ -1.59
CLK3-212ENST00000563418 CRPP02741 224 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 LTBRP36941 435 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 SUMO2P61956 95 aaKnown RBP5.12□□□□□ -1.59
CLK3-212ENST00000563418 GFRA3O60609 400 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 IGKV3-11P04433 115 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 RBM3P98179 157 aaKnown RBP5.12□□□□□ -1.59
CLK3-212ENST00000563418 FHL1Q13642 323 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 LINC00643Q86TS7 51 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 C16orf92Q96LL3 132 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 CSDC2Q9Y534 153 aaKnown RBP5.12□□□□□ -1.59
CLK3-212ENST00000563418 IL11RAQ14626 422 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 LYZL4Q96KX0 146 aa5.12□□□□□ -1.59
CLK3-212ENST00000563418 NDUFS7O75251 213 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 CXCL12P48061 93 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 PCP2Q8IVA1 136 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 SNRNP200O75643 2136 aaKnown RBP5.11□□□□□ -1.59
CLK3-212ENST00000563418 SHISA5Q8N114 240 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 TPRP12270 2363 aaKnown RBP5.11□□□□□ -1.59
CLK3-212ENST00000563418 LEPROTO15243 131 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 PRSS12P56730 875 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 DEFB108BQ8NET1 73 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 C1orf147Q96MC9 270 aaPredicted RBP5.11□□□□□ -1.59
CLK3-212ENST00000563418 ZNF784Q8NCA9 323 aaPredicted RBP5.11□□□□□ -1.59
CLK3-212ENST00000563418 C20orf78Q9BR46 151 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 ALKBH6Q3KRA9 238 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 UCN2Q96RP3 112 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 CECR9P0C854 216 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 NTF4P34130 210 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 NRGNQ92686 78 aa5.11□□□□□ -1.59
CLK3-212ENST00000563418 VWC2LB2RUY7 222 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 FAM60AQ9NP50 221 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 MED12Q93074 2177 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 A0A1B0GX51 115 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 M0R1B8 84 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 ANAPC1Q9H1A4 1944 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 F5P12259 2224 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 hADV29S1A0JD25 119 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 LTAP01374 205 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 CXCL5P42830 114 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 RPL39P5Q59GN2 51 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 SCARF2Q96GP6 870 aaPredicted RBP5.1□□□□□ -1.59
CLK3-212ENST00000563418 MCRIP2Q9BUT9 160 aaKnown RBP5.1□□□□□ -1.59
CLK3-212ENST00000563418 SPAARA0A1B0GVQ0 90 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 ARMS2P0C7Q2 107 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 TIMM21Q9BVV7 248 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 TRAV12-1A0A0B4J245 112 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 FOXG1P55316 489 aaPredicted RBP5.1□□□□□ -1.59
CLK3-212ENST00000563418 HCP5Q6MZN7 132 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 PHF3Q92576 2039 aaKnown RBP5.1□□□□□ -1.59
CLK3-212ENST00000563418 TRBV10-2A0A0K0K1G8 114 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 SPRY3O43610 288 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 MAGEA5P43359 124 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 DTX2Q86UW9 622 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 VSIG2Q96IQ7 327 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 IGKV1D-43A0A0B4J1Z2 117 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 IGHV5-51A0A0C4DH38 117 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 FAM90A27PA6NNH2 459 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 UBE2L6O14933 153 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 AGFG2O95081 481 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 IGHV3-13P01766 116 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms