RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ZNF491Q8N8L2 437 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 NPBQ8NG41 125 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 ZNF48Q96MX3 618 aaPredicted RBP10.35□□□□□ -0.75
USB1-207ENST00000563149 MAP1LC3CQ9BXW4 147 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 PSG8Q9UQ74 426 aa10.35□□□□□ -0.75
USB1-207ENST00000563149 OVOL3O00110 214 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 MRPS12O15235 138 aaKnown RBP10.34□□□□□ -0.75
USB1-207ENST00000563149 NBR2O15453 112 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 NDUFA3O95167 84 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 HLA-DRB1P01911 266 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 CEACAM3P40198 252 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 KIR3DL3Q8N743 410 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 OR11H6Q8NGC7 330 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 RNF125Q96EQ8 232 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 DPM3Q9P2X0 92 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 CUL9Q8IWT3 2517 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
USB1-207ENST00000563149 HTR1DP28221 377 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
USB1-207ENST00000563149 SPATA12Q7Z6I5 190 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 ZC2HC1AQ96GY0 325 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 ZNF414Q96IQ9 312 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
USB1-207ENST00000563149 NAV3Q8IVL0 2385 aa10.33□□□□□ -0.76
USB1-207ENST00000563149 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
USB1-207ENST00000563149 HSBP1L1C9JCN9 74 aa10.33□□□□□ -0.76
USB1-207ENST00000563149 TIMM23O14925 209 aa10.33□□□□□ -0.76
USB1-207ENST00000563149 DLX1P56177 255 aa10.33□□□□□ -0.76
USB1-207ENST00000563149 TCF15Q12870 199 aa10.33□□□□□ -0.76
USB1-207ENST00000563149 ZNF672Q499Z4 452 aaPredicted RBP10.33□□□□□ -0.76
USB1-207ENST00000563149 FBLL1A6NHQ2 334 aaKnown RBP10.32□□□□□ -0.76
USB1-207ENST00000563149 LYNX1G3V0Z9 82 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 LYNX1P0DP58 116 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 FBXL19-AS1Q494R0 122 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 ZNF493Q6ZR52 646 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 CFHR4Q92496 578 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 ONECUT1Q9UBC0 465 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 BDP1A6H8Y1 2624 aa10.32□□□□□ -0.76
USB1-207ENST00000563149 NPIPB5A8MRT5 1133 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 M0QZ24 198 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 M0R1W7 72 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 IL4P05112 153 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 CD24P25063 80 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 MFAP4P55083 255 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 AAMDCQ9H7C9 122 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 COX11Q9Y6N1 276 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 DSPP15924 2871 aaKnown RBP10.31□□□□□ -0.76
USB1-207ENST00000563149 ARMS2P0C7Q2 107 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 CT45A10P0DMU9 189 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
USB1-207ENST00000563149 PSG9Q00887 426 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 SLC25A34Q6PIV7 304 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 NEU4Q8WWR8 484 aaPredicted RBP10.31□□□□□ -0.76
USB1-207ENST00000563149 C17orf77Q96MU5 243 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
USB1-207ENST00000563149 ARFGEF3Q5TH69 2177 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 LOC400499M0QZD8 3231 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 GNG7O60262 68 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 CSN1S1P47710 185 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 PRB3Q04118 309 aaPredicted RBP10.3□□□□□ -0.76
USB1-207ENST00000563149 LINC00173Q6ZV60 143 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 IGFBPL1Q8WX77 278 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 SPENQ96T58 3664 aaKnown RBP10.3□□□□□ -0.76
USB1-207ENST00000563149 MALRD1Q5VYJ5 2156 aa10.3□□□□□ -0.76
USB1-207ENST00000563149 IGLV11-55A0A075B6I3 123 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 ODF3BA8MYP8 253 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 TCF21O43680 179 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 SCGB2A1O75556 95 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 TOX4O94842 621 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 S100A7P31151 101 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 CRIP1P50238 77 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 PRR30Q53SZ7 412 aaPredicted RBP10.29□□□□□ -0.76
USB1-207ENST00000563149 LDLRAD2Q5SZI1 272 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 LINC01545Q5VT33 79 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 TTC9CQ8N5M4 171 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 TIMD4Q96H15 378 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 CBY1Q9Y3M2 126 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 OOSP1A8MZH6 123 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 PRTN3P24158 256 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 NBL1P41271 181 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 PTTG1IPP53801 180 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 RELQ04864 619 aaPredicted RBP10.29□□□□□ -0.76
USB1-207ENST00000563149 UBE2V1Q13404 147 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 SAPCD1Q5SSQ6 148 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 ZNF562Q6V9R5 426 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 FA2HQ7L5A8 372 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 OR10AG1Q8NH19 301 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 LINC01560Q8TB33 94 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 FANCD2OSQ96PS1 177 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 PMCHL2Q9BQD1 86 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 SCRT2Q9NQ03 307 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 THYN1Q9P016 225 aa10.29□□□□□ -0.76
USB1-207ENST00000563149 PLXNB1O43157 2135 aa10.28□□□□□ -0.76
USB1-207ENST00000563149 PRRC2CQ9Y520 2896 aaKnown RBP10.28□□□□□ -0.76
USB1-207ENST00000563149 K7ENP7 123 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms