RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 FSCN3Q9NQT6 498 aa3.91□□□□□ -1.78
TCF4-215ENST00000562638 RNF7Q9UBF6 113 aa3.91□□□□□ -1.78
TCF4-215ENST00000562638 GNG12Q9UBI6 72 aa3.91□□□□□ -1.78
TCF4-215ENST00000562638 SERP1Q9Y6X1 66 aa3.91□□□□□ -1.78
TCF4-215ENST00000562638 ARHGAP21Q5T5U3 1957 aa3.91□□□□□ -1.78
TCF4-215ENST00000562638 TRGV11A0A075B6L2 103 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 IGKV6D-21A0A0A0MT36 114 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 TRAV8-1A0A0A6YYK1 113 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 IGKV6-21A0A0C4DH24 114 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 A0A1B0GVT2 93 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 LINC01553A4QN01 128 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 TMEM150CB9EJG8 249 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 FAM229AH3BQW9 127 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 LTAP01374 205 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 MYCNOSP40205 109 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 DLX1P56177 255 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 POLR2LP62875 67 aaKnown RBP3.9□□□□□ -1.79
TCF4-215ENST00000562638 PAX8Q06710 450 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 ARFRP1Q13795 201 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 KRTAP27-1Q3LI81 207 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 VMA21Q3ZAQ7 101 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 TMEM170BQ5T4T1 132 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 FKBP1CQ5VVH2 108 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 CEMP1Q6PRD7 247 aaPredicted RBP3.9□□□□□ -1.79
TCF4-215ENST00000562638 Q6ZR03 302 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 RPRMLQ8N4K4 120 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 CYYR1Q96J86 154 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 IGF2BP2-AS1Q96M15 143 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 STARD5Q9NSY2 213 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 CACNG5Q9UF02 275 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 EPDR1Q9UM22 224 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 F11RQ9Y624 299 aaKnown RBP3.9□□□□□ -1.79
TCF4-215ENST00000562638 R4GMQ9 66 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 SCN10AQ9Y5Y9 1956 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 KIAA1549LQ6ZVL6 1849 aa3.9□□□□□ -1.79
TCF4-215ENST00000562638 SMIM26A0A096LP01 95 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 TRGV5A0A0B4J1U4 118 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 TRAV26-2A0A0B4J265 109 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 hADV29S1A0JD25 119 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 PMS2P5A8MQ11 134 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 UPK2O00526 184 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 HOXA3O43365 443 aaPredicted RBP3.89□□□□□ -1.79
TCF4-215ENST00000562638 SLC25A20O43772 301 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 ACYP1P07311 99 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 CTLA4P16410 223 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 CA6P23280 308 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 MFAP2P55001 183 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 CCL8P80075 99 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 CD69Q07108 199 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 LY6KQ17RY6 165 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 CENPWQ5EE01 88 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 CT83Q5H943 113 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 KCTD18Q6PI47 426 aaPredicted RBP3.89□□□□□ -1.79
TCF4-215ENST00000562638 CD164L2Q6UWJ8 174 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 TBC1D26Q86UD7 250 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 WFDC3Q8IUB2 231 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 PRR15Q8IV56 129 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 WDR31Q8NA23 367 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 IFI27L1Q96BM0 104 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 ZNF503Q96F45 646 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 C1orf159Q96HA4 380 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 FOXB1Q99853 325 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 NPCDR1Q9BY65 106 aa3.89□□□□□ -1.79
TCF4-215ENST00000562638 C19orf25Q9UFG5 118 aaPredicted RBP3.89□□□□□ -1.79
TCF4-215ENST00000562638 IGKV2D-26A0A0A0MRZ7 120 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 UBE2L5PA0A1B0GUS4 154 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 LILRA5A6NI73 299 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 SYNGR2O43760 224 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 SCRG1O75711 98 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 NXPH3O95157 252 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 PRNPP04156 253 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 HMGN2P05204 90 aaKnown RBP3.88□□□□□ -1.79
TCF4-215ENST00000562638 ZNF883P0CG24 379 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 LIFP15018 202 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 GATA1P15976 413 aaPredicted RBP3.88□□□□□ -1.79
TCF4-215ENST00000562638 GRNP28799 593 aaKnown RBP3.88□□□□□ -1.79
TCF4-215ENST00000562638 PSMB2P49721 201 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 HBBP68871 147 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 ERCC8Q13216 396 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 SRSF9Q13242 221 aaKnown RBP eCLIP3.88□□□□□ -1.79
TCF4-215ENST00000562638 FAM201AQ5SY85 155 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 HES3Q5TGS1 186 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 CRIP3Q6Q6R5 217 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 ZFP2Q6ZN57 461 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
TCF4-215ENST00000562638 LINC00643Q86TS7 51 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 DRAM1Q8N682 238 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 Q8NA96 180 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 OR52N5Q8NH56 324 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 TMEM190Q8WZ59 177 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 MRPL53Q96EL3 112 aaKnown RBP3.88□□□□□ -1.79
TCF4-215ENST00000562638 ZNF442Q9H7R0 627 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 PSENENQ9NZ42 101 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 LINC00527Q9UJ94 153 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 RPUSD1Q9UJJ7 312 aaKnown RBP3.88□□□□□ -1.79
TCF4-215ENST00000562638 FANCMQ8IYD8 2048 aa3.88□□□□□ -1.79
TCF4-215ENST00000562638 TCF20Q9UGU0 1960 aaKnown RBP3.87□□□□□ -1.79
TCF4-215ENST00000562638 DOCK11Q5JSL3 2073 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 A0A1B0GWA3 101 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 WI2-2373I1.2A0A1W2PRP0 233 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms