RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 GNPDA2Q8TDQ7 276 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 FAM103A1Q9BTL3 118 aaKnown RBP-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 IMUPQ9GZP8 106 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 PBOV1Q9GZY1 135 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 TMEM138Q9NPI0 162 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 NUP98P52948 1817 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 UBR2Q8IWV8 1755 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 TNCP24821 2201 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 MUC4Q99102 2169 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 COL24A1Q17RW2 1714 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 ERP29P30040 261 aaKnown RBP-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 ATP5G3P48201 142 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 BCL2L15Q5TBC7 163 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 C1orf134Q5TEV5 83 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 Q6ZS92 163 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 OR5AS1Q8N127 324 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 OTUD6BQ8N6M0 293 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 TET1Q8NFU7 2136 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 ZNF431Q8TF32 576 aaPredicted RBP-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 TEX37Q96LM6 180 aa-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 CHD3Q12873 2000 aaKnown RBP-0.03□□□□□ -2.41
PSMA4-221ENST00000560842 C17orf112F2Z3M2 114 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 TAX1BP3O14907 124 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 CYBAP13498 195 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 SERPINB9P50453 376 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 MYL5Q02045 173 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 PATE2Q6UY27 113 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 MUCL1Q96DR8 90 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 MED29Q9NX70 200 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 SLC22A13Q9Y226 551 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 BCL9O00512 1426 aa-0.04□□□□□ -2.42
PSMA4-221ENST00000560842 JMJD7-PLA2G4BH0Y9G9 81 aa-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 GGCTO75223 188 aaKnown RBP-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 MYL6P60660 151 aa-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 UBE2BP63146 152 aa-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 CDK6Q00534 326 aa-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 SPATA45Q537H7 98 aa-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 OR10AG1Q8NH19 301 aa-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 TRPM1Q7Z4N2 1603 aa-0.05□□□□□ -2.42
PSMA4-221ENST00000560842 FANCMQ8IYD8 2048 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 UNC13CQ8NB66 2214 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 DMBT1Q9UGM3 2413 aaPredicted RBP-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 FAM159BA6NKW6 160 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 HLA-EP13747 358 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 ZNF137PP52743 207 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 SIGMAR1Q99720 223 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 HSPB8Q9UJY1 196 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 JPT1Q9UK76 154 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 ERBINQ96RT1 1412 aa-0.06□□□□□ -2.42
PSMA4-221ENST00000560842 TMEM256-PLSCR3K7ERE1 68 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 PPYP01298 95 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 OR10J4P0C629 311 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 CDKN2CP42773 168 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 POP5Q969H6 163 aaKnown RBP-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 RAB37Q96AX2 223 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 GGACTQ9BVM4 153 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 KIFC1Q9BW19 673 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 WFDC10AQ9H1F0 79 aa-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 NMNAT1Q9HAN9 279 aaPredicted RBP-0.07□□□□□ -2.42
PSMA4-221ENST00000560842 TRAV27A0A087WT01 109 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 TMEM114B3SHH9 223 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 M0R233 179 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 IFNA7P01567 189 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 ERVS71-1P61550 626 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 ITGB3BPQ13352 177 aaPredicted RBP-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 GOLT1AQ6ZVE7 132 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 BTF3L4Q96K17 158 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 OR52A1Q9UKL2 312 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 PCF11O94913 1555 aaKnown RBP-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 MGAMO43451 1857 aa-0.08□□□□□ -2.42
PSMA4-221ENST00000560842 TRBV30A0A0K0K1B3 111 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 DYNLT3P51808 116 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 LIN52Q52LA3 116 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 EIF5AL1Q6IS14 154 aaKnown RBP-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 ARPINQ7Z6K5 226 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 OR5D16Q8NGK9 328 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 TSKUQ8WUA8 353 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 NABP2Q9BQ15 211 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 NPCDR1Q9BY65 106 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 SPRR2GQ9BYE4 73 aa-0.09□□□□□ -2.42
PSMA4-221ENST00000560842 IGSF10Q6WRI0 2623 aa-0.1□□□□□ -2.42
PSMA4-221ENST00000560842 CCL4P13236 92 aa-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 SPINT3P49223 89 aa-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 RAB5CP51148 216 aa-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 C6orf52Q5T4I8 152 aa-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 OR10X1Q8NGY0 326 aa-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 NISCHQ9Y2I1 1504 aa-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 CEP164Q9UPV0 1460 aa-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 SYNE2Q8WXH0 6885 aaKnown RBP-0.1□□□□□ -2.43
PSMA4-221ENST00000560842 BDP1A6H8Y1 2624 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 COL7A1Q02388 2944 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 C5orf67F2Z3F1 127 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 C1QBP02746 253 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 CD14P08571 375 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 CST2P09228 141 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 TMEM14EPQ6UXP3 125 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 PPTC7Q8NI37 304 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 PPP1R14BQ96C90 147 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 HYLS1Q96M11 299 aa-0.11□□□□□ -2.43
PSMA4-221ENST00000560842 RNF11Q9Y3C5 154 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms