RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RNF222A6NCQ9 220 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 SRRM4A7MD48 611 aaKnown RBP11.03□□□□□ -0.64
TRAF3-208ENST00000560371 A0A0U1RRA0 63 aa11.02□□□□□ -0.64
TRAF3-208ENST00000560371 SFTA2Q6UW10 78 aa11.02□□□□□ -0.64
TRAF3-208ENST00000560371 IGKV1D-17A0A075B6S4 117 aa11.02□□□□□ -0.64
TRAF3-208ENST00000560371 TRAV9-1A0A075B6T8 112 aa11.02□□□□□ -0.64
TRAF3-208ENST00000560371 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 NBL1P41271 181 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
TRAF3-208ENST00000560371 PEF1Q9UBV8 284 aaKnown RBP11.02□□□□□ -0.65
TRAF3-208ENST00000560371 CYSLTR1Q9Y271 337 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 SNAI2O43623 268 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 NAPSAO96009 420 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 ZNF98A6NK75 572 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 ASCL4Q6XD76 172 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 RCHY1Q96PM5 261 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 SCRT1Q9BWW7 348 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 FCN3O75636 299 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 PPBPP02775 128 aa11.02□□□□□ -0.65
TRAF3-208ENST00000560371 SRSF1Q07955 248 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAF3-208ENST00000560371 HGFACQ04756 655 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 TRGV9Q99603 122 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 DTX1Q86Y01 620 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 WDR83OSQ9Y284 106 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 RPL23P62829 140 aaKnown RBP11.01□□□□□ -0.65
TRAF3-208ENST00000560371 FAM19A2Q8N3H0 131 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 GGTLC1Q9BX51 225 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 LHFPL4Q7Z7J7 247 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 IGKV2-40A0A087WW87 121 aaPredicted RBP11.01□□□□□ -0.65
TRAF3-208ENST00000560371 IGKV2D-40P01614 121 aaPredicted RBP11.01□□□□□ -0.65
TRAF3-208ENST00000560371 GFI1BQ5VTD9 330 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 TREML4Q6UXN2 200 aa11.01□□□□□ -0.65
TRAF3-208ENST00000560371 TRGV1A0A0A0MS02 117 aa11□□□□□ -0.65
TRAF3-208ENST00000560371 EVI2AP22794 236 aa11□□□□□ -0.65
TRAF3-208ENST00000560371 Q6P435 159 aa11□□□□□ -0.65
TRAF3-208ENST00000560371 GFI1Q99684 422 aa11□□□□□ -0.65
TRAF3-208ENST00000560371 DSCAML1Q8TD84 2053 aa11□□□□□ -0.65
TRAF3-208ENST00000560371 C5orf63A6NC05 138 aa11□□□□□ -0.65
TRAF3-208ENST00000560371 TTC9CQ8N5M4 171 aa11□□□□□ -0.65
TRAF3-208ENST00000560371 Q71RC1 249 aaPredicted RBP10.99□□□□□ -0.65
TRAF3-208ENST00000560371 RNF182Q8N6D2 247 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 GHRHP01286 108 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 ZNF138P52744 262 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 RIPPLY3P57055 190 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 MPZP25189 248 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 RPRMLQ8N4K4 120 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 ORMDL2Q53FV1 153 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
TRAF3-208ENST00000560371 TRAV5A0A0B4J249 113 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 PRB4P10163 310 aaPredicted RBP10.99□□□□□ -0.65
TRAF3-208ENST00000560371 FXYD7P58549 80 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 PAX2Q02962 417 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 UBE2E2Q96LR5 201 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 TNFSF13O75888 250 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 CD28P10747 220 aa10.99□□□□□ -0.65
TRAF3-208ENST00000560371 A0A087WWC5 75 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 NPC2P61916 151 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 C14orf144Q96I85 54 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 UBE2E1P51965 193 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 CKS1BP61024 79 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 IGHV3-64A0A075B6Q5 118 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 TRAV3A0A0B4J244 114 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 OCC1Q8TAD7 63 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 BTCP35070 178 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
TRAF3-208ENST00000560371 LHFPL1Q86WI0 220 aa10.98□□□□□ -0.65
TRAF3-208ENST00000560371 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
TRAF3-208ENST00000560371 LY6G6EA0A0G2JKS1 128 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 U3KQA8 63 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 INS-IGF2F8WCM5 200 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 INSP01308 110 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 RUSC1-AS1Q66K80 236 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 LY6G6FQ5SQ64 297 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 DAZ1Q9NQZ3 744 aaKnown RBP10.97□□□□□ -0.65
TRAF3-208ENST00000560371 LINC00473A8K010 186 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 SUMO4Q6EEV6 95 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 MGST2Q99735 147 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 A0A1B0GWB2 263 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 GZMBP10144 247 aa10.97□□□□□ -0.65
TRAF3-208ENST00000560371 TRBV6-6A0A0A6YYG2 114 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 IGKV1-16P04430 117 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 IFITM2Q01629 132 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 PIP4P1Q86T03 277 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 TMEM86BQ8N661 226 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 TRAV8-2A0A0B4J237 113 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 H0YIZ8 118 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 LINC00614P0C842 121 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 LCN12Q6JVE5 192 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 TMEM190Q8WZ59 177 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 SRSF8Q9BRL6 282 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms