RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 OR8B3Q8NGG8 313 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 ZC2HC1AQ96GY0 325 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 MCEEQ96PE7 176 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 CBLN4Q9NTU7 201 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 TAS2R4Q9NYW5 299 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 U3KQ87 197 aa2.09□□□□□ -2.07
TDP1-217ENST00000557782 CCDC171Q6TFL3 1326 aa2.09□□□□□ -2.08
TDP1-217ENST00000557782 CDK5RAP2Q96SN8 1893 aa2.09□□□□□ -2.08
TDP1-217ENST00000557782 KIF21AQ7Z4S6 1674 aa2.09□□□□□ -2.08
TDP1-217ENST00000557782 ZFC3H1O60293 1989 aaKnown RBP2.09□□□□□ -2.08
TDP1-217ENST00000557782 KDM5BQ9UGL1 1544 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 TIAM1Q13009 1591 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 TRBV27A0A0K0K1C4 114 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 FNDC10F2Z333 226 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 J3QR89 54 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 K7EP13 123 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 TPST1O60507 370 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 IGLV3-19P01714 112 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 C1QCP02747 245 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 RPL22P35268 128 aaKnown RBP2.08□□□□□ -2.08
TDP1-217ENST00000557782 ESRGQ1W209 222 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 SPANXN5Q5MJ07 72 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 TEX29Q8N6K0 151 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 OR4B1Q8NGF8 309 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 OR5H6Q8NGV6 325 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 BRK1Q8WUW1 75 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 SMIM3Q9BZL3 60 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 CCL26Q9Y258 94 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 WDR97A6NE52 1622 aa2.08□□□□□ -2.08
TDP1-217ENST00000557782 RRBP1Q9P2E9 1410 aaKnown RBP2.08□□□□□ -2.08
TDP1-217ENST00000557782 PRXQ9BXM0 1461 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 CUX1P39880 1505 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 HMGXB3Q12766 1538 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 TANC2Q9HCD6 1990 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 GCC2Q8IWJ2 1684 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 A0A096LPI6 279 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 MT-ND6P03923 174 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 SHBGP04278 402 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 CTSDP07339 412 aaPredicted RBP2.07□□□□□ -2.08
TDP1-217ENST00000557782 KLRD1Q13241 179 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 ZNF345Q14585 488 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 TMEM244Q5VVB8 128 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 PATE2Q6UY27 113 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 ZNF826PQ6ZT77 177 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 Q6ZTI0 123 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 OR4S1Q8NGB4 309 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 OR5A2Q8NGI9 324 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 C1orf54Q8WWF1 131 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 TVP23CQ96ET8 276 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 PRELID3AQ96N28 172 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 C20orf166-AS1Q96NR2 134 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 PRO2289Q9P1D8 64 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 LY96Q9Y6Y9 160 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 SHANK1Q9Y566 2161 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 RTL9Q8NET4 1388 aa2.07□□□□□ -2.08
TDP1-217ENST00000557782 ZSWIM8A7E2V4 1837 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 IGKV1D-42A0A075B6H8 117 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 IGLV3-9A0A075B6K5 115 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 A0A1W2PNN7 141 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 E7EQL1 145 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 PGLYRP1O75594 196 aaPredicted RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 PROSCO94903 275 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 MT-ND4LP03901 98 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 BAALC-AS2P0C853 105 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 MGST1P10620 155 aaKnown RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 CSRP1P21291 193 aaKnown RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 CRYGSP22914 178 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 PEBP1P30086 187 aaKnown RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 RPL26P61254 145 aaKnown RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 Q5XG85 94 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 C7orf65Q6ZTY9 151 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 MMGT1Q8N4V1 131 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 FAM216BQ8N7L0 139 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 ZNF418Q8TF45 676 aaPredicted RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 CHCHD1Q96BP2 118 aaKnown RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 OR5AC2Q9NZP5 309 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 RPL26L1Q9UNX3 145 aaKnown RBP2.06□□□□□ -2.08
TDP1-217ENST00000557782 ARHGAP35Q9NRY4 1499 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 WDR7Q9Y4E6 1490 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 SLIT2O94813 1529 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 MAP3K1Q13233 1512 aa2.06□□□□□ -2.08
TDP1-217ENST00000557782 C17orf112F2Z3M2 114 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 LYRM1O43325 122 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 SMIM24O75264 130 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 RAB5CP51148 216 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 LSM3P62310 102 aaKnown RBP2.05□□□□□ -2.08
TDP1-217ENST00000557782 MRPS36P82909 103 aaKnown RBP2.05□□□□□ -2.08
TDP1-217ENST00000557782 TMEM14EPQ6UXP3 125 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 LINC00301Q8NCQ3 95 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 NAT14Q8WUY8 206 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 CGREF1Q99674 301 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 C14orf132Q9NPU4 83 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 OVOS2A0A0J9YW53 1432 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 OVOS2Q6IE36 1432 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 ERCC6L2Q5T890 1561 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 TRPM1Q7Z4N2 1603 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 ABCA5Q8WWZ7 1642 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 CC2D2AQ9P2K1 1620 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 CUL7Q14999 1698 aa2.05□□□□□ -2.08
TDP1-217ENST00000557782 MPDZO75970 2070 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms