RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 MBD3L3A6NE82 208 aaPredicted RBP6.4□□□□□ -1.38
SV2B-206ENST00000557410 MBD3L5A6NJ08 208 aaPredicted RBP6.4□□□□□ -1.38
SV2B-206ENST00000557410 TSPOP30536 169 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 APOBEC3AP31941 199 aaPredicted RBP6.4□□□□□ -1.38
SV2B-206ENST00000557410 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
SV2B-206ENST00000557410 CACNG7P62955 275 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 ASPHD1Q5U4P2 390 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 IGFL2Q6UWQ7 119 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 MBD3L2Q8NHZ7 208 aaPredicted RBP6.4□□□□□ -1.38
SV2B-206ENST00000557410 C20orf144Q9BQM9 153 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 PSG8Q9UQ74 426 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 NOTCH2Q04721 2471 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 PROP1O75360 226 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 FAM106CPP0CH98 169 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 FXYD7P58549 80 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 PRSS8Q16651 343 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 METTL26Q96S19 204 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 FOXC2Q99958 501 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 OTORQ9NRC9 128 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 C21orf62Q9NYP8 219 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 DKK4Q9UBT3 224 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 PHLDA3Q9Y5J5 127 aa6.4□□□□□ -1.38
SV2B-206ENST00000557410 ZNF134P52741 427 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 MSMPQ1L6U9 139 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 SPRNQ5BIV9 151 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 FER1L6-AS1Q8NA97 138 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 LY96Q9Y6Y9 160 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 PLXNB1O43157 2135 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 A0A087X0K7 114 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 SH2D7A6NKC9 451 aaPredicted RBP6.4□□□□□ -1.39
SV2B-206ENST00000557410 OR11H12B2RN74 326 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 M0R381 172 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 PSG1P11464 419 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 GNLYP22749 145 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 OR11H1Q8NG94 326 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 OR11H2Q8NH07 326 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.39
SV2B-206ENST00000557410 MGAQ8IWI9 3026 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 LOC400499M0QZD8 3231 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 LOC105371242A0A075B767 164 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 PF4V1P10720 104 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 Q0VG73 95 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 Q8TCH9 128 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 RNF125Q96EQ8 232 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 ASCL2Q99929 193 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 ANKHD1Q8IWZ3 2542 aaKnown RBP6.39□□□□□ -1.39
SV2B-206ENST00000557410 NPIPB5A8MRT5 1133 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 PRSS2P07478 247 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 RNASE2P10153 161 aaKnown RBP6.39□□□□□ -1.39
SV2B-206ENST00000557410 YPEL3P61236 119 aaPredicted RBP6.39□□□□□ -1.39
SV2B-206ENST00000557410 OR10J6PQ8NGY7 276 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 TMEM133Q9H2Q1 129 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 PTPRBP23467 1997 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.39□□□□□ -1.39
SV2B-206ENST00000557410 TCRAP04437 139 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 NPPCP23582 126 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 ATP5J2P56134 94 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 HIST1H1AQ02539 215 aaPredicted RBP6.39□□□□□ -1.39
SV2B-206ENST00000557410 PRR30Q53SZ7 412 aaPredicted RBP6.39□□□□□ -1.39
SV2B-206ENST00000557410 KLF17Q5JT82 389 aaPredicted RBP6.39□□□□□ -1.39
SV2B-206ENST00000557410 SFTA2Q6UW10 78 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 SMIM12Q96EX1 92 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 NBEAQ8NFP9 2946 aa6.39□□□□□ -1.39
SV2B-206ENST00000557410 F2Z2F3 143 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 VDAC2P45880 294 aaPredicted RBP6.38□□□□□ -1.39
SV2B-206ENST00000557410 SEM1Q6ZVN7 128 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 ATP5L2Q7Z4Y8 100 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 TTC9CQ8N5M4 171 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 C18orf32Q8TCD1 76 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 WNK1Q9H4A3 2382 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 A0A0G2JNJ9 132 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 NUPR1O60356 82 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 TMEM200BQ69YZ2 307 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 Q6AWC8 147 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 ZNF474Q6S9Z5 364 aaPredicted RBP6.38□□□□□ -1.39
SV2B-206ENST00000557410 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 OR2K2Q8NGT1 345 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 C8orf46Q8TAG6 207 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 CHCHD1Q96BP2 118 aaKnown RBP6.38□□□□□ -1.39
SV2B-206ENST00000557410 PYGO2Q9BRQ0 406 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 NHP2Q9NX24 153 aaKnown RBP6.38□□□□□ -1.39
SV2B-206ENST00000557410 Q9UFV3 132 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 C2CD3Q4AC94 2353 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 DYSFO75923 2080 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 SPTBN4Q9H254 2564 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 IGHV3OR16-10A0A075B7F0 116 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 TMEM238LA0A1B0GVL6 79 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 A6NJY4 79 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 GGTLC3B5MD39 225 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 SYS1-DBNDD2H3BUS1 97 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 RIPPLY3P57055 190 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 UTF1Q5T230 341 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 Q8N7P7 452 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 LSM4Q9Y4Z0 139 aaKnown RBP6.38□□□□□ -1.39
SV2B-206ENST00000557410 CSPG4Q6UVK1 2322 aa6.38□□□□□ -1.39
SV2B-206ENST00000557410 BOD1L1Q8NFC6 3051 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms