RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 ZNF705FA8MVS1 300 aaPredicted RBP15.15■□□□□ 0.02
FOXN3-214ENST00000557258 ZNF253O75346 499 aa15.15■□□□□ 0.02
FOXN3-214ENST00000557258 ZNF705DP0CH99 300 aaPredicted RBP15.15■□□□□ 0.02
FOXN3-214ENST00000557258 ZNF705BP0CI00 300 aaPredicted RBP15.15■□□□□ 0.02
FOXN3-214ENST00000557258 SAA4P35542 130 aa15.15■□□□□ 0.02
FOXN3-214ENST00000557258 IGFL4Q6B9Z1 124 aa15.15■□□□□ 0.02
FOXN3-214ENST00000557258 C14orf144Q96I85 54 aa15.15■□□□□ 0.02
FOXN3-214ENST00000557258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.02
FOXN3-214ENST00000557258 APCSP02743 223 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 MBD6Q96DN6 1003 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 TBX15Q96SF7 602 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 SIRPDQ9H106 197 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 LINC01548A6NM66 108 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 RPL19P84098 196 aaKnown RBP15.14■□□□□ 0.01
FOXN3-214ENST00000557258 ZNF562Q6V9R5 426 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 PGLYRP4Q96LB8 373 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 TMUB1Q9BVT8 246 aa15.14■□□□□ 0.01
FOXN3-214ENST00000557258 F8W735 103 aaPredicted RBP15.13■□□□□ 0.01
FOXN3-214ENST00000557258 EFNA4P52798 201 aa15.13■□□□□ 0.01
FOXN3-214ENST00000557258 USP9YO00507 2555 aaPredicted RBP15.13■□□□□ 0.01
FOXN3-214ENST00000557258 IGLV11-55A0A075B6I3 123 aa15.13■□□□□ 0.01
FOXN3-214ENST00000557258 HIST1H1EP10412 219 aaKnown RBP15.13■□□□□ 0.01
FOXN3-214ENST00000557258 TOMM20LQ6UXN7 152 aa15.13■□□□□ 0.01
FOXN3-214ENST00000557258 GRAMD2BQ96HH9 432 aa15.13■□□□□ 0.01
FOXN3-214ENST00000557258 NOL4LQ96MY1 436 aaPredicted RBP15.13■□□□□ 0.01
FOXN3-214ENST00000557258 SHANK2-AS3Q9BTD1 123 aa15.13■□□□□ 0.01
FOXN3-214ENST00000557258 LRRK2Q5S007 2527 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 IGHV7-81A0A0B4J1V7 117 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 WDR73Q6P4I2 378 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 TMEM219Q86XT9 240 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 GTSF1Q8WW33 167 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 MLST8Q9BVC4 326 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 KLF12Q9Y4X4 402 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 LTAP01374 205 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 CCDC144NLQ6NUI1 221 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 CHRDL1Q9BU40 450 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 NAGKQ9UJ70 344 aa15.12■□□□□ 0.01
FOXN3-214ENST00000557258 IGHV2-70DA0A0C4DH43 119 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 TOMM40O96008 361 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 P01737 135 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 HLA-DRB1P01911 266 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 EGR2P11161 476 aaPredicted RBP15.11■□□□□ 0.01
FOXN3-214ENST00000557258 NTF3P20783 257 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 TPPP2P59282 170 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 PAX2Q02962 417 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 Q86TA4 180 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 BPIFA4PQ86YQ2 179 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 LINC00527Q9UJ94 153 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 DOPEY1Q5JWR5 2465 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 TRBV19A0A075B6N1 114 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 G3V318 75 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 IGLV2-11P01706 119 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 LMO4P61968 165 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 VN1R17PQ8TDU5 208 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 TSKUQ8WUA8 353 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 C21orf62Q9NYP8 219 aa15.11■□□□□ 0.01
FOXN3-214ENST00000557258 POLR3KQ9Y2Y1 108 aaPredicted RBP15.11■□□□□ 0.01
FOXN3-214ENST00000557258 IGHV3OR16-13A0A075B7E8 117 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 IGHV3-74A0A0B4J1X5 117 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 H3BRN7 92 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 M0QZ24 198 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 AMTP48728 403 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 KRTDAPP60985 99 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 FAM231DQ6ZW35 169 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 Q8N9W7 124 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 OR4F17Q8NGA8 305 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 FMC1Q96HJ9 113 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 AJUBAQ96IF1 538 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 OTORQ9NRC9 128 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 CSPG4Q6UVK1 2322 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 TRBV9A0A0B4J1U6 114 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 FOXA3P55318 350 aaPredicted RBP15.1■□□□□ 0.01
FOXN3-214ENST00000557258 BRD3OSQ6XYD6 125 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 Q8N6K4 173 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 RPP21Q9H633 154 aaKnown RBP15.1■□□□□ 0.01
FOXN3-214ENST00000557258 TBL2Q9Y4P3 447 aaKnown RBP15.1■□□□□ 0.01
FOXN3-214ENST00000557258 SOX21Q9Y651 276 aaPredicted RBP15.1■□□□□ 0.01
FOXN3-214ENST00000557258 IGHV3-66A0A0C4DH42 116 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 IGHV4-39P01824 125 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 HLA-DQA1P01909 254 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 COL8A1P27658 744 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 DAZAP1Q96EP5 407 aaKnown RBP15.1■□□□□ 0.01
FOXN3-214ENST00000557258 TPPP3Q9BW30 176 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 FBXL7Q9UJT9 491 aa15.1■□□□□ 0.01
FOXN3-214ENST00000557258 ZNF462Q96JM2 2506 aa15.09■□□□□ 0.01
FOXN3-214ENST00000557258 MT-ND6P03923 174 aa15.09■□□□□ 0.01
FOXN3-214ENST00000557258 IGLC2P0DOY2 106 aa15.09■□□□□ 0.01
FOXN3-214ENST00000557258 MFAP4P55083 255 aa15.09■□□□□ 0.01
FOXN3-214ENST00000557258 SIGLEC15Q6ZMC9 328 aa15.09■□□□□ 0.01
FOXN3-214ENST00000557258 SIGLECL1Q8N7X8 197 aa15.09■□□□□ 0.01
FOXN3-214ENST00000557258 A0A1W2PS18 150 aa15.08■□□□□ 0
FOXN3-214ENST00000557258 A8MWP6 167 aa15.08■□□□□ 0
FOXN3-214ENST00000557258 ATP6V0E1O15342 81 aa15.08■□□□□ 0
FOXN3-214ENST00000557258 GPR183P32249 361 aa15.08■□□□□ 0
FOXN3-214ENST00000557258 Q0VG73 95 aa15.08■□□□□ 0
FOXN3-214ENST00000557258 ZC2HC1AQ96GY0 325 aa15.08■□□□□ 0
FOXN3-214ENST00000557258 SRSF8Q9BRL6 282 aaKnown RBP15.08■□□□□ 0
FOXN3-214ENST00000557258 NPIPB5A8MRT5 1133 aa15.08■□□□□ 0
FOXN3-214ENST00000557258 FAM106CPP0CH98 169 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms