RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZNF600Q6ZNG1 722 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 BPIFA4PQ86YQ2 179 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 ARL6IP6Q8N6S5 226 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 IGF2BP2-AS1Q96M15 143 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 SRD5A3Q9H8P0 318 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 OTORQ9NRC9 128 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 OSTCQ9NRP0 149 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 EPDR1Q9UM22 224 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 URGCP-MRPS24S4R325 110 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 EPG5Q9HCE0 2579 aa6.46□□□□□ -1.38
ATXN3-235ENST00000556082 WNK2Q9Y3S1 2297 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 IGHV3OR16-10A0A075B7F0 116 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 TRAV41A0A0B4J266 112 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 MDFIC2A0A1B0GVS7 189 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 FAM223BA6NKX1 122 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 LINC01548A6NM66 108 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 PHOX2AO14813 284 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 MRPS12O15235 138 aaKnown RBP6.45□□□□□ -1.38
ATXN3-235ENST00000556082 FSHBP01225 129 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 IGLV2-8P01709 118 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 IGHG2P01859 326 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 IL4P05112 153 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 RAB9AP51151 201 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 CNN1P51911 297 aaKnown RBP6.45□□□□□ -1.38
ATXN3-235ENST00000556082 RANP62826 216 aaKnown RBP6.45□□□□□ -1.38
ATXN3-235ENST00000556082 RHOGP84095 191 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 PDE6HQ13956 83 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 C15orf32Q32M92 178 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 CENPWQ5EE01 88 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 C9orf139Q6ZV77 190 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 FAM223AQ8IWN6 122 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 C5orf17Q8NAS9 161 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 ATG101Q9BSB4 218 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 ZNF586Q9NXT0 402 aa6.45□□□□□ -1.38
ATXN3-235ENST00000556082 SPG11Q96JI7 2443 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 TRBV19A0A075B6N1 114 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 PGPA6NDG6 321 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 ZNF98A6NK75 572 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 G3V318 75 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 K7EN84 100 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 FAM3BP58499 235 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-235ENST00000556082 KRTAP10-9P60411 292 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 ATP5G2Q06055 141 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 USF2Q15853 346 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-235ENST00000556082 ECSCRQ19T08 205 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 FAM231DQ6ZW35 169 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 OR4F17Q8NGA8 305 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 EEF1AKMT3Q96AZ1 226 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 USMG5Q96IX5 58 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 Q9H3A6 140 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 IL36BQ9NZH7 164 aa6.44□□□□□ -1.38
ATXN3-235ENST00000556082 ABCA2Q9BZC7 2435 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 PGPEP1LA6NFU8 196 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 PPP5D1E7EU14 171 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 H3BUX3 64 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 AP4M1O00189 453 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 ZNF253O75346 499 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 TGFAP01135 160 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 TCRAP04437 139 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 SLC25A5P05141 298 aaKnown RBP6.43□□□□□ -1.38
ATXN3-235ENST00000556082 CLEC3BP05452 202 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 S100A6P06703 90 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 IGHV4-31P0DP07 118 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 PLA2G2AP14555 144 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 RPL7P18124 248 aaKnown RBP6.43□□□□□ -1.38
ATXN3-235ENST00000556082 PPIFP30405 207 aaKnown RBP6.43□□□□□ -1.38
ATXN3-235ENST00000556082 C1orf194Q5T5A4 169 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 TMEM219Q86XT9 240 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 BAGE2Q86Y30 109 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 OR5R1Q8NH85 324 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 BLNKQ8WV28 456 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 FMC1Q96HJ9 113 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 ZNF414Q96IQ9 312 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 GPR82Q96P67 336 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 CHRDL1Q9BU40 450 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 MLST8Q9BVC4 326 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 PRDM13Q9H4Q3 707 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 AURKAIP1Q9NWT8 199 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-235ENST00000556082 V9GYV3 84 aa6.43□□□□□ -1.38
ATXN3-235ENST00000556082 LRRK2Q5S007 2527 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 ABCA1O95477 2261 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 SERTM2A0A1B0GWG4 89 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 TMEM89A2RUT3 159 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 OR2T8A6NH00 312 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 J3QKU1 62 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 BMPR1BO00238 502 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 UBE2CO00762 179 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 TRGC2P03986 189 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 ERVFC1-1P60608 527 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 RELQ04864 619 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-235ENST00000556082 Q5PR19 223 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 LEMD1Q68G75 181 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 TOMM20LQ6UXN7 152 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 SIGLEC15Q6ZMC9 328 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 ZFP82Q8N141 532 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 CCDC140Q96MF4 163 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 RABAC1Q9UI14 185 aa6.42□□□□□ -1.38
ATXN3-235ENST00000556082 SOX21Q9Y651 276 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-235ENST00000556082 S4R3C0 116 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms