RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 GAGE13Q4V321 117 aa8.36□□□□□ -1.07
EFCAB11-208ENST00000555872 TRPT1Q86TN4 253 aaKnown RBP8.36□□□□□ -1.07
EFCAB11-208ENST00000555872 NUP35Q8NFH5 326 aa8.36□□□□□ -1.07
EFCAB11-208ENST00000555872 C1RLQ9NZP8 487 aa8.36□□□□□ -1.07
EFCAB11-208ENST00000555872 COL5A1P20908 1838 aaPredicted RBP8.36□□□□□ -1.07
EFCAB11-208ENST00000555872 TRBV6-6A0A0A6YYG2 114 aa8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 C17orf98A8MV24 154 aa8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 LINC00205P59089 165 aa8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 ZNF672Q499Z4 452 aaPredicted RBP8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 WIPF2Q8TF74 440 aaPredicted RBP8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 MPC1Q9Y5U8 109 aa8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 FAM53AQ6NSI3 398 aaPredicted RBP8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 MRPL32Q9BYC8 188 aaKnown RBP8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 WDR87Q6ZQQ6 2873 aa8.35□□□□□ -1.07
EFCAB11-208ENST00000555872 NPIPB11E5RHQ5 1161 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 NDUFA7O95182 113 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 OR9G9P0C7N8 305 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 ZNF883P0CG24 379 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 NMUP48645 174 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 MIR17HGQ75NE6 70 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 FOXA2Q9Y261 457 aaPredicted RBP8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 BRWD1-AS2P59051 145 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 C1orf195Q5TG92 126 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 RABAC1Q9UI14 185 aa8.34□□□□□ -1.07
EFCAB11-208ENST00000555872 LY6G6EA0A0G2JKS1 128 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 CRLF1O75462 422 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 H1FXQ92522 213 aaKnown RBP8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 LINC00479Q96M42 142 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 HEYLQ9NQ87 328 aaPredicted RBP8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 FZR1Q9UM11 496 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 U3KQA8 63 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 GGTLC3B5MD39 225 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 ZNF138P52744 262 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 CFHR1Q03591 330 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 Q6ZT83 130 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 LRRC29Q8WV35 223 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 SNRNP40Q96DI7 357 aaKnown RBP8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 SLC25A39Q9BZJ4 359 aaPredicted RBP8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 JPT2Q9H910 190 aa8.33□□□□□ -1.08
EFCAB11-208ENST00000555872 HIGD1CA8MV81 97 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 ZFAND5O76080 213 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 TAL2Q16559 108 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 Q6ZQT7 251 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 Q6ZR03 302 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 ABHD12Q8N2K0 398 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 ZNF645Q8N7E2 425 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 ATP6V0E2Q8NHE4 81 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 PLEKHA3Q9HB20 300 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 SDK2Q58EX2 2172 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 FER1L5A0AVI2 2057 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 ASXL3Q9C0F0 2248 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 KRTAP27-1Q3LI81 207 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 AMTNQ6UX39 209 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 C1orf159Q96HA4 380 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 IGF2BP2-AS1Q96M15 143 aa8.32□□□□□ -1.08
EFCAB11-208ENST00000555872 OXTP01178 125 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 GUSBP1Q15486 140 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 Q6Q795 121 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 CHCHD1Q96BP2 118 aaKnown RBP8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 FRYQ5TBA9 3013 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 IGLV3-32A0A0A0MS00 114 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 ZIC3O60481 467 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 DTX2Q86UW9 622 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 TEX45Q8NA69 505 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 FOXB1Q99853 325 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 C5orf49A4QMS7 147 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 J3QL48 77 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 SNCGO76070 127 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 KIR2DS2P43631 304 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 CSN1S1P47710 185 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 GUSBP11Q6P575 273 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 TEPPQ6URK8 271 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 NFAM1Q8NET5 270 aaPredicted RBP8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 TMEM167BQ9NRX6 74 aa8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 LSM4Q9Y4Z0 139 aaKnown RBP8.31□□□□□ -1.08
EFCAB11-208ENST00000555872 ZNF318Q5VUA4 2279 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 HCFC1P51610 2035 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 EML6Q6ZMW3 1958 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 HES1Q14469 280 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 PLPPR2Q96GM1 343 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 TIMD4Q96H15 378 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 C1QTNF5Q9BXJ0 243 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 FGF6P10767 208 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 LINC01545Q5VT33 79 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 ZNF497Q6ZNH5 498 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 LINC00596Q86U02 117 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 PROCRQ9UNN8 238 aa8.3□□□□□ -1.08
EFCAB11-208ENST00000555872 LINC00473A8K010 186 aa8.29□□□□□ -1.08
EFCAB11-208ENST00000555872 PATE3B3GLJ2 98 aa8.29□□□□□ -1.08
EFCAB11-208ENST00000555872 PRSS46E5RG02 174 aa8.29□□□□□ -1.08
EFCAB11-208ENST00000555872 IGHV3-9P01782 118 aa8.29□□□□□ -1.08
EFCAB11-208ENST00000555872 RTL8BQ17RB0 113 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms