RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 OR5AC2Q9NZP5 309 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 EPDR1Q9UM22 224 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 BAIAP2Q9UQB8 552 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 NUP98P52948 1817 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 SLX4Q8IY92 1834 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 PTPRSQ13332 1948 aa2.32□□□□□ -2.04
VRK1-205ENST00000555402 TCOF1Q13428 1488 aaKnown RBP2.32□□□□□ -2.04
VRK1-205ENST00000555402 IGHV1-58A0A0C4DH39 117 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 F8W036 122 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 H3BRN7 92 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 HIST1H2BKO60814 126 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 MT-ND4LP03901 98 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 HIST1H2BJP06899 126 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 DEFA4P12838 97 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 NFYAP23511 347 aaPredicted RBP2.31□□□□□ -2.04
VRK1-205ENST00000555402 RAB5CP51148 216 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 RRAS2P62070 204 aaPredicted RBP2.31□□□□□ -2.04
VRK1-205ENST00000555402 HBBP68871 147 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 ERHP84090 104 aaKnown RBP2.31□□□□□ -2.04
VRK1-205ENST00000555402 ZNF90Q03938 601 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 HES1Q14469 280 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 WHAMMP3Q1A5X7 153 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 GLYATL3Q5SZD4 288 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 LINC00305Q7Z4B0 112 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 CBLN4Q9NTU7 201 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 ERG28Q9UKR5 140 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 TIMM9Q9Y5J7 89 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 DSPPQ9NZW4 1301 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 ROCK2O75116 1388 aaKnown RBP2.31□□□□□ -2.04
VRK1-205ENST00000555402 RIC1Q4ADV7 1423 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 TNS3Q68CZ2 1445 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 ZNF518AQ6AHZ1 1483 aa2.31□□□□□ -2.04
VRK1-205ENST00000555402 ARHGEF28Q8N1W1 1705 aaKnown RBP2.31□□□□□ -2.04
VRK1-205ENST00000555402 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 TCL1BO95988 128 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 PEBP1P30086 187 aaKnown RBP2.3□□□□□ -2.04
VRK1-205ENST00000555402 RPL26P61254 145 aaKnown RBP2.3□□□□□ -2.04
VRK1-205ENST00000555402 MYL5Q02045 173 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 PABPC1L2AQ5JQF8 200 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 FAM27BQ5VT28 67 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 PDZD9Q8IXQ8 264 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 SLC30A7Q8NEW0 376 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 ARL11Q969Q4 196 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 TMEM106AQ96A25 262 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 ZNF714Q96N38 554 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 CXCL16Q9H2A7 254 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 RPL26L1Q9UNX3 145 aaKnown RBP2.3□□□□□ -2.04
VRK1-205ENST00000555402 HHLA3Q9XRX5 114 aa2.3□□□□□ -2.04
VRK1-205ENST00000555402 SMG6Q86US8 1419 aaKnown RBP2.3□□□□□ -2.04
VRK1-205ENST00000555402 GREB1Q4ZG55 1949 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 FAM135AQ9P2D6 1515 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 PRG4Q92954 1404 aaPredicted RBP2.29□□□□□ -2.04
VRK1-205ENST00000555402 TRAV13-1A0A0B4J241 112 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 IFNA4P05014 189 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 HLA-EP13747 358 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 KDELR1P24390 212 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 RPS25P62851 125 aaKnown RBP2.29□□□□□ -2.04
VRK1-205ENST00000555402 EIF5AL1Q6IS14 154 aaKnown RBP2.29□□□□□ -2.04
VRK1-205ENST00000555402 LYZL1Q6UWQ5 148 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 DPPA3Q6W0C5 159 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 Q8NDZ9 215 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 TP53RKQ96S44 253 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 BANF2Q9H503 90 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 HS3ST2Q9Y278 367 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 ARHGAP32A7KAX9 2087 aa2.29□□□□□ -2.04
VRK1-205ENST00000555402 ADAMTS7Q9UKP4 1686 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 A0A0G2JQZ4 141 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 C7orf71A4D174 169 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 H7C2G1 150 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 J3QR89 54 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 K7ERU9 68 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 SDCBPO00560 298 aaPredicted RBP2.28□□□□□ -2.04
VRK1-205ENST00000555402 GNG7O60262 68 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 SMIM24O75264 130 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 MT-ND6P03923 174 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 CRYGAP11844 174 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 RPL22P35268 128 aaKnown RBP2.28□□□□□ -2.04
VRK1-205ENST00000555402 DYNLT1P63172 113 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 TMEM244Q5VVB8 128 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 TMEM14EPQ6UXP3 125 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 PHF5AQ7RTV0 110 aaKnown RBP2.28□□□□□ -2.04
VRK1-205ENST00000555402 OR5D16Q8NGK9 328 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 OR5H6Q8NGV6 325 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 OR4K15Q8NH41 348 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 OR4C6Q8NH72 309 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 AQP3Q92482 292 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 TMEM203Q969S6 136 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 GGACTQ9BVM4 153 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 TNFSF18Q9UNG2 199 aa2.28□□□□□ -2.04
VRK1-205ENST00000555402 SYNJ1O43426 1573 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 FRMPD1Q5SYB0 1578 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 ARHGEF11O15085 1522 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 DLC1Q96QB1 1528 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 NISCHQ9Y2I1 1504 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 UHRF1BP1LA0JNW5 1464 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 DISP2A7MBM2 1401 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 MYOM3Q5VTT5 1437 aa2.27□□□□□ -2.05
VRK1-205ENST00000555402 IBTKQ9P2D0 1353 aaPredicted RBP2.27□□□□□ -2.05
VRK1-205ENST00000555402 A0A0D9SG52 128 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms